Protein–RNA interactions for Protein: Q9UQQ2

SH2B3, SH2B adapter protein 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3Q9UQQ2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.06■□□□□ 0
SH2B3Q9UQQ2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.06■□□□□ 0
SH2B3Q9UQQ2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SH2B3Q9UQQ2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SH2B3Q9UQQ2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.06■□□□□ 0
SH2B3Q9UQQ2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SH2B3Q9UQQ2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SH2B3Q9UQQ2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.06■□□□□ 0
SH2B3Q9UQQ2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.06■□□□□ 0
SH2B3Q9UQQ2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SH2B3Q9UQQ2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
SH2B3Q9UQQ2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
SH2B3Q9UQQ2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
SH2B3Q9UQQ2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SH2B3Q9UQQ2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ 0
SH2B3Q9UQQ2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SH2B3Q9UQQ2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SH2B3Q9UQQ2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SH2B3Q9UQQ2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.05■□□□□ 0
SH2B3Q9UQQ2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SH2B3Q9UQQ2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
SH2B3Q9UQQ2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SH2B3Q9UQQ2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 RN7SL204P-201ENST00000582831 262 ntBASIC15.05■□□□□ -0
SH2B3Q9UQQ2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 CICP11-201ENST00000434745 2827 ntBASIC15.05■□□□□ -0
SH2B3Q9UQQ2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.05■□□□□ -0
SH2B3Q9UQQ2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 AC138969.3-201ENST00000546612 1459 ntBASIC15.04■□□□□ -0
SH2B3Q9UQQ2 AC138932.2-201ENST00000548268 1459 ntBASIC15.04■□□□□ -0
SH2B3Q9UQQ2 AC126755.4-201ENST00000549796 1459 ntBASIC15.04■□□□□ -0
SH2B3Q9UQQ2 KRT8P44-201ENST00000441609 1350 ntBASIC15.04■□□□□ -0
SH2B3Q9UQQ2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 AC236430.1-201ENST00000402231 743 ntBASIC15.04■□□□□ -0
SH2B3Q9UQQ2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 KRT18P43-201ENST00000469825 1281 ntBASIC15.04■□□□□ -0
SH2B3Q9UQQ2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 AC011467.4-201ENST00000594891 528 ntBASIC15.04■□□□□ -0
SH2B3Q9UQQ2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 AC006486.2-201ENST00000624246 2199 ntBASIC15.04■□□□□ -0
SH2B3Q9UQQ2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SH2B3Q9UQQ2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.03■□□□□ -0
SH2B3Q9UQQ2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.03■□□□□ -0
SH2B3Q9UQQ2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SH2B3Q9UQQ2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SH2B3Q9UQQ2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SH2B3Q9UQQ2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
SH2B3Q9UQQ2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SH2B3Q9UQQ2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
SH2B3Q9UQQ2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.03■□□□□ -0
SH2B3Q9UQQ2 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.03■□□□□ -0
SH2B3Q9UQQ2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
SH2B3Q9UQQ2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms