Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 Z97205.2-201ENST00000564697 1639 ntBASIC20.09■□□□□ 0.81
PDZRN3Q9UPQ7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 AC092933.1-201ENST00000393644 945 ntBASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 MIR1908-201ENST00000410394 80 ntBASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 HIST3H2BA-201ENST00000436555 524 ntBASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 RN7SL219P-201ENST00000582872 296 ntBASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 AL022328.1-201ENST00000610050 478 ntBASIC20.08■□□□□ 0.81
PDZRN3Q9UPQ7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
PDZRN3Q9UPQ7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
PDZRN3Q9UPQ7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDZRN3Q9UPQ7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDZRN3Q9UPQ7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDZRN3Q9UPQ7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDZRN3Q9UPQ7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
PDZRN3Q9UPQ7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
PDZRN3Q9UPQ7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PDZRN3Q9UPQ7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDZRN3Q9UPQ7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 FO681548.1-201ENST00000455617 1132 ntBASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 AC036164.1-201ENST00000570544 333 ntBASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 AC133539.2-201ENST00000604757 467 ntBASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 AL391069.4-201ENST00000609583 481 ntBASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PDZRN3Q9UPQ7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 CTBP2P5-201ENST00000454986 1264 ntBASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 PDIA3P1-201ENST00000471856 1510 ntBASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 AC020907.1-201ENST00000616460 1350 ntBASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN3Q9UPQ7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 AP001282.1-201ENST00000531301 1499 ntBASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms