Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 AC055876.2-201ENST00000531834 546 ntBASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 AC011467.4-201ENST00000594891 528 ntBASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 AL662799.1-202ENST00000614205 422 ntBASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGC3Q9UN70 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.39■□□□□ 0.22
PCDHGC3Q9UN70 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.39■□□□□ 0.22
PCDHGC3Q9UN70 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.39■□□□□ 0.22
PCDHGC3Q9UN70 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDHGC3Q9UN70 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDHGC3Q9UN70 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 DRD5P1-201ENST00000456605 1438 ntBASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 MIR661-201ENST00000384842 89 ntBASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 AL355385.1-201ENST00000606123 409 ntBASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 TCAF2P1-201ENST00000291129 2421 ntBASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 AGAP7P-201ENST00000582299 2062 ntBASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 AGAP14-201ENST00000624701 2060 ntBASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGC3Q9UN70 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms