Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 DOC2GP-204ENST00000639052 2548 ntBASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 AC018665.1-201ENST00000622927 1362 ntBASIC15.11■□□□□ 0.01
CPNE7Q9UBL6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 KRT43P-201ENST00000434019 910 ntBASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 AL512343.1-201ENST00000605837 169 ntBASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 AC005252.2-201ENST00000624630 1141 ntBASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPNE7Q9UBL6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 AC127383.1-201ENST00000444697 1800 ntBASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 GAPDHP40-201ENST00000505218 1006 ntBASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 AC068587.3-201ENST00000526613 355 ntBASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 AC025181.2-201ENST00000606994 802 ntBASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 MIR6805-201ENST00000615055 62 ntBASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.09■□□□□ 0.01
CPNE7Q9UBL6 AC092127.1-201ENST00000567093 3455 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms