Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 PCDHA3-202ENST00000532566 4594 ntBASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 AC005034.1-201ENST00000426657 489 ntBASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 OR7E47P-204ENST00000575924 449 ntBASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 AC091812.2-201ENST00000619081 385 ntBASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 AC025580.3-201ENST00000617932 1424 ntBASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 OR2I1P-210ENST00000642037 4691 ntBASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
CCM2LQ9NUG4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 AC004461.1-201ENST00000412461 403 ntBASIC14.89□□□□□ -0.03
CCM2LQ9NUG4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms