Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 AC105250.1-201ENST00000509378 2057 ntBASIC18.61■□□□□ 0.57
SALL1Q9NSC2 AC148477.4-201ENST00000613430 1793 ntBASIC18.61■□□□□ 0.57
SALL1Q9NSC2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 AC136621.1-201ENST00000624017 2304 ntBASIC18.61■□□□□ 0.57
SALL1Q9NSC2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.61■□□□□ 0.57
SALL1Q9NSC2 AC009090.5-201ENST00000624886 2285 ntBASIC18.61■□□□□ 0.57
SALL1Q9NSC2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 AL139094.1-201ENST00000405549 1188 ntBASIC18.6■□□□□ 0.57
SALL1Q9NSC2 CD8B2-202ENST00000417670 633 ntBASIC18.6■□□□□ 0.57
SALL1Q9NSC2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 AC078819.1-201ENST00000547454 765 ntBASIC18.6■□□□□ 0.57
SALL1Q9NSC2 AC012085.1-201ENST00000548270 765 ntBASIC18.6■□□□□ 0.57
SALL1Q9NSC2 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SALL1Q9NSC2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 RN7SL48P-201ENST00000579283 293 ntBASIC18.59■□□□□ 0.57
SALL1Q9NSC2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SALL1Q9NSC2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 AC022494.1-201ENST00000466044 728 ntBASIC18.58■□□□□ 0.57
SALL1Q9NSC2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 RNA5SP486-201ENST00000515961 83 ntBASIC18.58■□□□□ 0.57
SALL1Q9NSC2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.58■□□□□ 0.57
SALL1Q9NSC2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms