Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 AP001063.1-201ENST00000568332 529 ntBASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 AP000845.1-201ENST00000581677 2131 ntBASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 AL162727.3-201ENST00000635661 2787 ntBASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KIAA1549Q9HCM3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 AC016694.1-201ENST00000434179 700 ntBASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 KLF2P4-201ENST00000451959 1225 ntBASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 RHOXF1P1-202ENST00000635473 501 ntBASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 AL359258.3-201ENST00000622910 2331 ntBASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 CICP11-201ENST00000434745 2827 ntBASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 CNN2P8-201ENST00000421872 913 ntBASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 EIF3FP3-201ENST00000434851 1086 ntBASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 AC025181.2-201ENST00000606994 802 ntBASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.74□□□□□ -0.21
KIAA1549Q9HCM3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms