Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 FAM185BP-201ENST00000443595 716 ntBASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 SAPCD2P3-201ENST00000455031 850 ntBASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 AC091304.2-201ENST00000564639 760 ntBASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 LINC01711-201ENST00000598340 967 ntBASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 AL645728.2-201ENST00000641974 660 ntBASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SND1-IT1Q9HBX3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 WASH6P-202ENST00000359512 1437 ntBASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC10.5□□□□□ -0.73
SND1-IT1Q9HBX3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms