Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 MST1L-201ENST00000442552 2185 ntBASIC16.92■□□□□ 0.3
HIPK3Q9H422 PCDH8P1-201ENST00000428983 2773 ntBASIC16.92■□□□□ 0.3
HIPK3Q9H422 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK3Q9H422 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK3Q9H422 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
HIPK3Q9H422 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIPK3Q9H422 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 SERPINA13P-202ENST00000478994 924 ntBASIC16.91■□□□□ 0.3
HIPK3Q9H422 TMEM198B-204ENST00000484016 896 ntBASIC16.91■□□□□ 0.3
HIPK3Q9H422 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 MIR4313-201ENST00000580760 101 ntBASIC16.91■□□□□ 0.3
HIPK3Q9H422 PPY2P-201ENST00000582808 702 ntBASIC16.91■□□□□ 0.3
HIPK3Q9H422 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 AC025181.2-201ENST00000606994 802 ntBASIC16.91■□□□□ 0.3
HIPK3Q9H422 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 PRSS30P-206ENST00000641773 873 ntBASIC16.91■□□□□ 0.3
HIPK3Q9H422 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIPK3Q9H422 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.91■□□□□ 0.3
HIPK3Q9H422 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 AC091046.1-201ENST00000331871 207 ntBASIC16.9■□□□□ 0.3
HIPK3Q9H422 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.9■□□□□ 0.3
HIPK3Q9H422 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 SPTLC1P5-201ENST00000450718 252 ntBASIC16.9■□□□□ 0.3
HIPK3Q9H422 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 U62317.3-201ENST00000608319 855 ntBASIC16.9■□□□□ 0.3
HIPK3Q9H422 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIPK3Q9H422 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
HIPK3Q9H422 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HIPK3Q9H422 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms