Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NKX6-2Q9C056 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 RNF152P1-201ENST00000397754 604 ntBASIC12.69□□□□□ -0.38
NKX6-2Q9C056 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 AL845331.1-201ENST00000424978 1190 ntBASIC12.69□□□□□ -0.38
NKX6-2Q9C056 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 TSPY5P-201ENST00000426936 936 ntBASIC12.69□□□□□ -0.38
NKX6-2Q9C056 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 DUT-205ENST00000558813 769 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 AC139887.4-201ENST00000607877 719 ntBASIC12.69□□□□□ -0.38
NKX6-2Q9C056 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.69□□□□□ -0.38
NKX6-2Q9C056 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 BEND3P3-201ENST00000611030 2440 ntBASIC12.68□□□□□ -0.38
NKX6-2Q9C056 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms