Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 FAM220BP-201ENST00000377689 816 ntBASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 SLC25A39P2-201ENST00000537614 270 ntBASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 MIR4469-201ENST00000583919 79 ntBASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CHRDL1Q9BU40 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 AC011477.6-201ENST00000604980 1927 ntBASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 AC010327.4-202ENST00000591484 748 ntBASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 AC022145.2-201ENST00000598203 171 ntBASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 AC105339.1-204ENST00000636249 355 ntBASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 AC138035.3-201ENST00000622706 2791 ntBASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.47□□□□□ -0.41
CHRDL1Q9BU40 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.46□□□□□ -0.41
CHRDL1Q9BU40 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms