Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 AC079316.1-201ENST00000548397 411 ntBASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 ECM1P1-201ENST00000604092 1279 ntBASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 MIR6869-201ENST00000619434 62 ntBASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PAAF1Q9BRP4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 BRWD1P1-201ENST00000401091 371 ntBASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 AC114812.1-204ENST00000449669 728 ntBASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 DUX4L45-201ENST00000566406 1057 ntBASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 AC132938.4-201ENST00000623835 848 ntBASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PAAF1Q9BRP4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 RNA5SP486-201ENST00000515961 83 ntBASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms