Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RAB40CQ96S21 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB40CQ96S21 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RAB40CQ96S21 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB40CQ96S21 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB40CQ96S21 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB40CQ96S21 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.71□□□□□ -0.38
RAB40CQ96S21 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
RAB40CQ96S21 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.71□□□□□ -0.38
RAB40CQ96S21 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB40CQ96S21 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB40CQ96S21 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB40CQ96S21 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.71□□□□□ -0.38
RAB40CQ96S21 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RAB40CQ96S21 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RAB40CQ96S21 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.71□□□□□ -0.38
RAB40CQ96S21 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
RAB40CQ96S21 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RAB40CQ96S21 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB40CQ96S21 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
RAB40CQ96S21 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB40CQ96S21 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 HNRNPDP1-201ENST00000439535 754 ntBASIC12.7□□□□□ -0.38
RAB40CQ96S21 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.7□□□□□ -0.38
RAB40CQ96S21 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.7□□□□□ -0.38
RAB40CQ96S21 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RAB40CQ96S21 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.7□□□□□ -0.38
RAB40CQ96S21 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms