Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 AL049840.4-201ENST00000602422 811 ntBASIC12.94□□□□□ -0.34
GAFA1Q96PS6 CHCHD2P3-201ENST00000603038 451 ntBASIC12.94□□□□□ -0.34
GAFA1Q96PS6 MIR8072-201ENST00000614241 80 ntBASIC12.94□□□□□ -0.34
GAFA1Q96PS6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 AC138035.3-201ENST00000622706 2791 ntBASIC12.94□□□□□ -0.34
GAFA1Q96PS6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 AC148477.4-201ENST00000613430 1793 ntBASIC12.94□□□□□ -0.34
GAFA1Q96PS6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 AL109954.1-202ENST00000564051 2148 ntBASIC12.94□□□□□ -0.34
GAFA1Q96PS6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAFA1Q96PS6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 AC126365.1-201ENST00000578585 1514 ntBASIC12.93□□□□□ -0.34
GAFA1Q96PS6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 AC104596.2-201ENST00000512793 793 ntBASIC12.93□□□□□ -0.34
GAFA1Q96PS6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 AC104640.1-201ENST00000562617 2109 ntBASIC12.93□□□□□ -0.34
GAFA1Q96PS6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.93□□□□□ -0.34
GAFA1Q96PS6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 AC007431.3-201ENST00000623221 587 ntBASIC12.93□□□□□ -0.34
GAFA1Q96PS6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
GAFA1Q96PS6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 AC098850.1-201ENST00000419919 790 ntBASIC12.92□□□□□ -0.34
GAFA1Q96PS6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 VDAC1P7-201ENST00000462417 847 ntBASIC12.92□□□□□ -0.34
GAFA1Q96PS6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.92□□□□□ -0.34
GAFA1Q96PS6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms