Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 AC010327.5-201ENST00000586923 3061 ntBASIC11.89□□□□□ -0.51
AP1S3Q96PC3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
AP1S3Q96PC3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 AC129492.6-201ENST00000611383 1305 ntBASIC11.88□□□□□ -0.51
AP1S3Q96PC3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 PTCHD3P3-201ENST00000403073 906 ntBASIC11.88□□□□□ -0.51
AP1S3Q96PC3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 SLC25A6P2-201ENST00000497974 877 ntBASIC11.88□□□□□ -0.51
AP1S3Q96PC3 AC107918.2-201ENST00000530817 355 ntBASIC11.88□□□□□ -0.51
AP1S3Q96PC3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.88□□□□□ -0.51
AP1S3Q96PC3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.88□□□□□ -0.51
AP1S3Q96PC3 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 AC005622.1-201ENST00000636801 1703 ntBASIC11.88□□□□□ -0.51
AP1S3Q96PC3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC11.88□□□□□ -0.51
AP1S3Q96PC3 PPT1-215ENST00000641471 2368 ntBASIC11.87□□□□□ -0.51
AP1S3Q96PC3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 AC016027.1-202ENST00000607927 1699 ntBASIC11.87□□□□□ -0.51
AP1S3Q96PC3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms