Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 KRT18P25-201ENST00000508931 1278 ntBASIC17.56■□□□□ 0.4
FGD4Q96M96 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.56■□□□□ 0.4
FGD4Q96M96 AC243960.2-201ENST00000600996 747 ntBASIC17.56■□□□□ 0.4
FGD4Q96M96 AC091271.1-201ENST00000611877 1162 ntBASIC17.56■□□□□ 0.4
FGD4Q96M96 AC132938.4-201ENST00000623835 848 ntBASIC17.56■□□□□ 0.4
FGD4Q96M96 AL139099.5-201ENST00000635274 300 ntBASIC17.56■□□□□ 0.4
FGD4Q96M96 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.56■□□□□ 0.4
FGD4Q96M96 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FGD4Q96M96 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FGD4Q96M96 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
FGD4Q96M96 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.56■□□□□ 0.4
FGD4Q96M96 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.56■□□□□ 0.4
FGD4Q96M96 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
FGD4Q96M96 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FGD4Q96M96 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
FGD4Q96M96 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.56■□□□□ 0.4
FGD4Q96M96 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FGD4Q96M96 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FGD4Q96M96 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
FGD4Q96M96 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.55■□□□□ 0.4
FGD4Q96M96 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
FGD4Q96M96 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
FGD4Q96M96 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.55■□□□□ 0.4
FGD4Q96M96 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
FGD4Q96M96 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.55■□□□□ 0.4
FGD4Q96M96 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.55■□□□□ 0.4
FGD4Q96M96 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
FGD4Q96M96 AC023310.1-201ENST00000554836 735 ntBASIC17.55■□□□□ 0.4
FGD4Q96M96 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.55■□□□□ 0.4
FGD4Q96M96 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.55■□□□□ 0.4
FGD4Q96M96 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.55■□□□□ 0.4
FGD4Q96M96 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.55■□□□□ 0.4
FGD4Q96M96 PRSS30P-206ENST00000641773 873 ntBASIC17.55■□□□□ 0.4
FGD4Q96M96 AC112504.1-201ENST00000623415 1841 ntBASIC17.55■□□□□ 0.4
FGD4Q96M96 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
FGD4Q96M96 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.55■□□□□ 0.4
FGD4Q96M96 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
FGD4Q96M96 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FGD4Q96M96 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.55■□□□□ 0.4
FGD4Q96M96 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
FGD4Q96M96 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.54■□□□□ 0.4
FGD4Q96M96 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
FGD4Q96M96 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
FGD4Q96M96 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.54■□□□□ 0.4
FGD4Q96M96 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 BCYRN1-201ENST00000418539 200 ntBASIC17.54■□□□□ 0.4
FGD4Q96M96 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.54■□□□□ 0.4
FGD4Q96M96 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.54■□□□□ 0.4
FGD4Q96M96 AC006033.1-201ENST00000440505 426 ntBASIC17.54■□□□□ 0.4
FGD4Q96M96 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.54■□□□□ 0.4
FGD4Q96M96 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.54■□□□□ 0.4
FGD4Q96M96 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
FGD4Q96M96 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.54■□□□□ 0.4
FGD4Q96M96 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.54■□□□□ 0.4
FGD4Q96M96 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.54■□□□□ 0.4
FGD4Q96M96 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.54■□□□□ 0.4
FGD4Q96M96 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
FGD4Q96M96 MIR4741-201ENST00000579822 90 ntBASIC17.54■□□□□ 0.4
FGD4Q96M96 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.54■□□□□ 0.4
FGD4Q96M96 AC103810.3-201ENST00000583567 96 ntBASIC17.54■□□□□ 0.4
FGD4Q96M96 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.54■□□□□ 0.4
FGD4Q96M96 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
FGD4Q96M96 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.54■□□□□ 0.4
FGD4Q96M96 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.54■□□□□ 0.4
FGD4Q96M96 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.54■□□□□ 0.4
FGD4Q96M96 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.54■□□□□ 0.4
FGD4Q96M96 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms