Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 AC136604.1-201ENST00000418535 575 ntBASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 TIMM8BP1-201ENST00000452384 211 ntBASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC18.1■□□□□ 0.49
CHAMP1Q96JM3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 AC084364.1-201ENST00000551967 1556 ntBASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 RNA5SP416-201ENST00000516838 111 ntBASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 AC027601.5-201ENST00000624065 2482 ntBASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHAMP1Q96JM3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHAMP1Q96JM3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CHAMP1Q96JM3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CHAMP1Q96JM3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CHAMP1Q96JM3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CHAMP1Q96JM3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHAMP1Q96JM3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CHAMP1Q96JM3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.08■□□□□ 0.49
CHAMP1Q96JM3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHAMP1Q96JM3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHAMP1Q96JM3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHAMP1Q96JM3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHAMP1Q96JM3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHAMP1Q96JM3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHAMP1Q96JM3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.08■□□□□ 0.49
CHAMP1Q96JM3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 HLA-H-201ENST00000383620 1096 ntBASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms