Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.59■□□□□ 0.25
SHC3Q92529 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC3Q92529 AC011467.4-201ENST00000594891 528 ntBASIC16.59■□□□□ 0.25
SHC3Q92529 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.59■□□□□ 0.25
SHC3Q92529 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.59■□□□□ 0.25
SHC3Q92529 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.59■□□□□ 0.25
SHC3Q92529 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.59■□□□□ 0.25
SHC3Q92529 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SHC3Q92529 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.59■□□□□ 0.25
SHC3Q92529 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.59■□□□□ 0.25
SHC3Q92529 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SHC3Q92529 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC3Q92529 AC023824.1-201ENST00000562945 2975 ntBASIC16.59■□□□□ 0.25
SHC3Q92529 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.59■□□□□ 0.25
SHC3Q92529 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.59■□□□□ 0.25
SHC3Q92529 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SHC3Q92529 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SHC3Q92529 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.25
SHC3Q92529 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SHC3Q92529 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SHC3Q92529 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.58■□□□□ 0.25
SHC3Q92529 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
SHC3Q92529 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
SHC3Q92529 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.58■□□□□ 0.25
SHC3Q92529 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SHC3Q92529 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.58■□□□□ 0.24
SHC3Q92529 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.58■□□□□ 0.24
SHC3Q92529 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.58■□□□□ 0.24
SHC3Q92529 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.58■□□□□ 0.24
SHC3Q92529 AC093214.1-201ENST00000511688 1107 ntBASIC16.58■□□□□ 0.24
SHC3Q92529 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.58■□□□□ 0.24
SHC3Q92529 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.58■□□□□ 0.24
SHC3Q92529 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.58■□□□□ 0.24
SHC3Q92529 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.58■□□□□ 0.24
SHC3Q92529 AC104794.3-201ENST00000566840 1248 ntBASIC16.58■□□□□ 0.24
SHC3Q92529 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.58■□□□□ 0.24
SHC3Q92529 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.58■□□□□ 0.24
SHC3Q92529 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SHC3Q92529 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 CLK3P2-201ENST00000427566 1453 ntBASIC16.58■□□□□ 0.24
SHC3Q92529 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.58■□□□□ 0.24
SHC3Q92529 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SHC3Q92529 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SHC3Q92529 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 AP000845.1-201ENST00000581677 2131 ntBASIC16.58■□□□□ 0.24
SHC3Q92529 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.58■□□□□ 0.24
SHC3Q92529 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SHC3Q92529 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHC3Q92529 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.57■□□□□ 0.24
SHC3Q92529 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.57■□□□□ 0.24
SHC3Q92529 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.57■□□□□ 0.24
SHC3Q92529 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SHC3Q92529 AL512638.1-201ENST00000457493 794 ntBASIC16.57■□□□□ 0.24
SHC3Q92529 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.57■□□□□ 0.24
SHC3Q92529 GAPDHP40-201ENST00000505218 1006 ntBASIC16.57■□□□□ 0.24
SHC3Q92529 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.57■□□□□ 0.24
SHC3Q92529 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.57■□□□□ 0.24
SHC3Q92529 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.57■□□□□ 0.24
SHC3Q92529 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.57■□□□□ 0.24
SHC3Q92529 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.57■□□□□ 0.24
SHC3Q92529 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
SHC3Q92529 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.57■□□□□ 0.24
SHC3Q92529 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.57■□□□□ 0.24
SHC3Q92529 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SHC3Q92529 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.57■□□□□ 0.24
SHC3Q92529 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SHC3Q92529 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms