Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATPAF2Q8N5M1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF2Q8N5M1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATPAF2Q8N5M1 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 RPL5P21-201ENST00000404620 815 ntBASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 AL589987.1-201ENST00000453380 819 ntBASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 MEIS3P1-201ENST00000495167 958 ntBASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 AC011467.4-201ENST00000594891 528 ntBASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.99■□□□□ 0.15
ATPAF2Q8N5M1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 AJ011932.1-201ENST00000621707 465 ntBASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 AL158212.4-201ENST00000624062 1286 ntBASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 PCDHA3-202ENST00000532566 4594 ntBASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
ATPAF2Q8N5M1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms