Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
VPS8Q8N3P4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
VPS8Q8N3P4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 REXO1L2P-201ENST00000425429 2069 ntBASIC23.99■■□□□ 1.43
VPS8Q8N3P4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 AC245100.3-201ENST00000441281 285 ntBASIC23.99■■□□□ 1.43
VPS8Q8N3P4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 AC008687.7-202ENST00000637404 953 ntBASIC23.99■■□□□ 1.43
VPS8Q8N3P4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
VPS8Q8N3P4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 RNA5SP486-201ENST00000515961 83 ntBASIC23.98■■□□□ 1.43
VPS8Q8N3P4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 C2orf69P2-201ENST00000562032 1123 ntBASIC23.98■■□□□ 1.43
VPS8Q8N3P4 AC006453.4-201ENST00000636949 1252 ntBASIC23.98■■□□□ 1.43
VPS8Q8N3P4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC23.98■■□□□ 1.43
VPS8Q8N3P4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 AL162727.3-201ENST00000635661 2787 ntBASIC23.97■■□□□ 1.43
VPS8Q8N3P4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 AC026434.2-201ENST00000506094 1078 ntBASIC23.97■■□□□ 1.43
VPS8Q8N3P4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 AC106820.3-201ENST00000561653 397 ntBASIC23.97■■□□□ 1.43
VPS8Q8N3P4 DUX4L45-201ENST00000566406 1057 ntBASIC23.97■■□□□ 1.43
VPS8Q8N3P4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC23.97■■□□□ 1.43
VPS8Q8N3P4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 AC132938.4-201ENST00000623835 848 ntBASIC23.96■■□□□ 1.43
VPS8Q8N3P4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS8Q8N3P4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms