Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LST1-210ENST00000376099 610 ntTSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 PIN1P1-201ENST00000412108 996 ntBASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 LST1-214ENST00000418507 726 ntTSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 DFFBP1-201ENST00000433250 979 ntBASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 CHCHD2P3-201ENST00000603038 451 ntBASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SCUBE3Q8IX30 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 AL353779.1-201ENST00000434793 351 ntBASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 API5-211ENST00000534695 560 ntTSL 5 BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 CFTRP2-201ENST00000634304 199 ntBASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.39■□□□□ 0.21
SCUBE3Q8IX30 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 FAM86LP-201ENST00000478302 853 ntBASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 AC000095.1-201ENST00000603208 874 ntBASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 AP003400.6-201ENST00000624698 740 ntBASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms