Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 AC069224.1-201ENST00000566372 1715 ntBASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 AL607033.1-201ENST00000623900 1599 ntBASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 DGCR5-201ENST00000399539 862 ntBASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 RN7SL752P-201ENST00000463779 287 ntBASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 AC011495.1-201ENST00000498085 584 ntBASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 CLK3P2-201ENST00000427566 1453 ntBASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 LINC02447-202ENST00000501888 2146 ntBASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.37■□□□□ 0.05
TRIM48Q8IWZ4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 CU639417.3-201ENST00000624240 1404 ntBASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 AC074338.1-201ENST00000416825 156 ntBASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 GAPDHP21-201ENST00000450301 1010 ntBASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 WASH4P-201ENST00000564273 1246 ntBASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.36■□□□□ 0.05
TRIM48Q8IWZ4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM48Q8IWZ4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM48Q8IWZ4 AC022188.1-201ENST00000620960 1664 ntBASIC15.35■□□□□ 0.05
TRIM48Q8IWZ4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM48Q8IWZ4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM48Q8IWZ4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM48Q8IWZ4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM48Q8IWZ4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM48Q8IWZ4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM48Q8IWZ4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM48Q8IWZ4 CDC14C-201ENST00000428251 1719 ntBASIC15.35■□□□□ 0.05
TRIM48Q8IWZ4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM48Q8IWZ4 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM48Q8IWZ4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM48Q8IWZ4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms