Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 AC106886.4-201ENST00000623557 2502 ntBASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 AL691432.1-201ENST00000596308 1422 ntBASIC14.16□□□□□ -0.14
RP1L1Q8IWN7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 EIF4HP1-201ENST00000453115 687 ntBASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 AC093813.1-201ENST00000605066 256 ntBASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 FNTAP2-201ENST00000430308 634 ntBASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 BX284668.4-201ENST00000453917 508 ntBASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 MIR3907-201ENST00000579424 151 ntBASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.15□□□□□ -0.14
RP1L1Q8IWN7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RP1L1Q8IWN7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
RP1L1Q8IWN7 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RP1L1Q8IWN7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.15□□□□□ -0.15
RP1L1Q8IWN7 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.15
RP1L1Q8IWN7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms