Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 AL121723.1-201ENST00000445194 1519 ntBASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 AC138969.3-201ENST00000546612 1459 ntBASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 AC138932.2-201ENST00000548268 1459 ntBASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 AC126755.4-201ENST00000549796 1459 ntBASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 KRT18P43-201ENST00000469825 1281 ntBASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 AC015910.1-201ENST00000579400 975 ntBASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 AC004233.3-201ENST00000607794 1269 ntBASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 AL391069.4-201ENST00000609583 481 ntBASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 AC013268.4-201ENST00000637413 2228 ntBASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD3Q7Z3D4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 AC087481.3-201ENST00000602886 1894 ntBASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 AL132655.2-201ENST00000596276 594 ntBASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 SSR4P1-203ENST00000599569 2260 ntBASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms