Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 AC018695.7-201ENST00000624587 2492 ntBASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
OTOP1Q7RTM1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 CD8B2-202ENST00000417670 633 ntBASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 AC136604.1-201ENST00000418535 575 ntBASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 NKAIN1P1-201ENST00000435754 582 ntBASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 KRT18P25-201ENST00000508931 1278 ntBASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 AP005019.2-201ENST00000615104 511 ntBASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
OTOP1Q7RTM1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.89■□□□□ 0.46
OTOP1Q7RTM1 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 EEF1DP6-201ENST00000449232 372 ntBASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 AC107373.2-201ENST00000607735 490 ntBASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
OTOP1Q7RTM1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.88■□□□□ 0.45
OTOP1Q7RTM1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
OTOP1Q7RTM1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
OTOP1Q7RTM1 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.88■□□□□ 0.45
OTOP1Q7RTM1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.88■□□□□ 0.45
OTOP1Q7RTM1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
OTOP1Q7RTM1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OTOP1Q7RTM1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
OTOP1Q7RTM1 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OTOP1Q7RTM1 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
OTOP1Q7RTM1 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms