Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 MIR648-201ENST00000385046 94 ntBASIC14.1□□□□□ -0.15
RTL6Q6ICC9 AL442647.2-201ENST00000429864 857 ntBASIC14.1□□□□□ -0.15
RTL6Q6ICC9 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 FAM86LP-201ENST00000478302 853 ntBASIC14.1□□□□□ -0.15
RTL6Q6ICC9 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 AC119751.2-201ENST00000504529 210 ntBASIC14.1□□□□□ -0.15
RTL6Q6ICC9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 HNRNPUP1-201ENST00000554987 333 ntBASIC14.1□□□□□ -0.15
RTL6Q6ICC9 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 AC015936.2-201ENST00000593177 259 ntBASIC14.1□□□□□ -0.15
RTL6Q6ICC9 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RTL6Q6ICC9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 AC136604.1-201ENST00000418535 575 ntBASIC14.09□□□□□ -0.15
RTL6Q6ICC9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.09□□□□□ -0.15
RTL6Q6ICC9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 RPS2P32-201ENST00000439199 892 ntBASIC14.09□□□□□ -0.15
RTL6Q6ICC9 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 CROCCP4-201ENST00000457096 498 ntBASIC14.09□□□□□ -0.15
RTL6Q6ICC9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 USP32P1-208ENST00000506594 1164 ntBASIC14.09□□□□□ -0.15
RTL6Q6ICC9 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 SNX29P1-201ENST00000548357 1007 ntBASIC14.09□□□□□ -0.15
RTL6Q6ICC9 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 BRI3BPP1-201ENST00000594224 787 ntBASIC14.09□□□□□ -0.15
RTL6Q6ICC9 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 AL450472.2-201ENST00000603663 1156 ntBASIC14.09□□□□□ -0.15
RTL6Q6ICC9 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.09□□□□□ -0.15
RTL6Q6ICC9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RTL6Q6ICC9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms