Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AL109954.1-202ENST00000564051 2148 ntBASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 AC074338.1-201ENST00000416825 156 ntBASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 LINC01115-203ENST00000606068 577 ntBASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 CICP13-201ENST00000422015 2789 ntBASIC16.27■□□□□ 0.2
TTC39BQ5VTQ0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 AC007541.1-201ENST00000570282 1469 ntBASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 AC087481.3-201ENST00000602886 1894 ntBASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TTC39BQ5VTQ0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC39BQ5VTQ0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms