Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 KRT18P34-201ENST00000488218 1270 ntBASIC12.48□□□□□ -0.41
FAM78BQ5VT40 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 AL031432.2-201ENST00000566714 459 ntBASIC12.48□□□□□ -0.41
FAM78BQ5VT40 AL928711.1-201ENST00000570165 459 ntBASIC12.48□□□□□ -0.41
FAM78BQ5VT40 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 MIR4321-201ENST00000592276 80 ntBASIC12.48□□□□□ -0.41
FAM78BQ5VT40 AC104692.2-201ENST00000603054 253 ntBASIC12.48□□□□□ -0.41
FAM78BQ5VT40 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 ACTL9-202ENST00000612068 1252 ntBASIC12.48□□□□□ -0.41
FAM78BQ5VT40 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 AL645728.2-201ENST00000641974 660 ntBASIC12.48□□□□□ -0.41
FAM78BQ5VT40 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
FAM78BQ5VT40 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 WASH6P-202ENST00000359512 1437 ntBASIC12.47□□□□□ -0.41
FAM78BQ5VT40 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.47□□□□□ -0.41
FAM78BQ5VT40 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 FAM185BP-201ENST00000443595 716 ntBASIC12.47□□□□□ -0.41
FAM78BQ5VT40 AC108073.2-201ENST00000464002 357 ntBASIC12.47□□□□□ -0.41
FAM78BQ5VT40 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 AC004790.2-201ENST00000623588 572 ntBASIC12.47□□□□□ -0.41
FAM78BQ5VT40 AC117500.6-201ENST00000624871 588 ntBASIC12.47□□□□□ -0.41
FAM78BQ5VT40 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.47□□□□□ -0.41
FAM78BQ5VT40 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 AC126365.1-201ENST00000578585 1514 ntBASIC12.47□□□□□ -0.41
FAM78BQ5VT40 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
FAM78BQ5VT40 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms