Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RC3H1Q5TC82 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
RC3H1Q5TC82 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RC3H1Q5TC82 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RC3H1Q5TC82 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RC3H1Q5TC82 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RC3H1Q5TC82 RN7SKP214-201ENST00000364208 315 ntBASIC19.27■□□□□ 0.68
RC3H1Q5TC82 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC19.27■□□□□ 0.68
RC3H1Q5TC82 AC010141.1-201ENST00000411585 623 ntBASIC19.27■□□□□ 0.68
RC3H1Q5TC82 FAM58BP-201ENST00000439056 645 ntBASIC19.27■□□□□ 0.68
RC3H1Q5TC82 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC19.27■□□□□ 0.68
RC3H1Q5TC82 CEP164P1-201ENST00000455142 418 ntBASIC19.27■□□□□ 0.68
RC3H1Q5TC82 CDC23-208ENST00000505120 455 ntTSL 3 BASIC19.27■□□□□ 0.68
RC3H1Q5TC82 LY6E-208ENST00000520531 490 ntTSL 2 BASIC19.27■□□□□ 0.68
RC3H1Q5TC82 DUX4L46-201ENST00000566845 751 ntBASIC19.27■□□□□ 0.68
RC3H1Q5TC82 RN7SL555P-201ENST00000584742 339 ntBASIC19.27■□□□□ 0.68
RC3H1Q5TC82 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19.27■□□□□ 0.68
RC3H1Q5TC82 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RC3H1Q5TC82 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RC3H1Q5TC82 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
RC3H1Q5TC82 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RC3H1Q5TC82 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RC3H1Q5TC82 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RC3H1Q5TC82 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RC3H1Q5TC82 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.27■□□□□ 0.67
RC3H1Q5TC82 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RC3H1Q5TC82 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RC3H1Q5TC82 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RC3H1Q5TC82 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 AC112504.1-201ENST00000623415 1841 ntBASIC19.26■□□□□ 0.67
RC3H1Q5TC82 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 AC026316.1-201ENST00000398900 414 ntBASIC19.26■□□□□ 0.67
RC3H1Q5TC82 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 RPL18P13-201ENST00000478088 569 ntBASIC19.26■□□□□ 0.67
RC3H1Q5TC82 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 AP003419.4-201ENST00000616071 517 ntBASIC19.26■□□□□ 0.67
RC3H1Q5TC82 AC002472.3-201ENST00000640124 621 ntBASIC19.26■□□□□ 0.67
RC3H1Q5TC82 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RC3H1Q5TC82 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 SHC1P1-201ENST00000425230 1745 ntBASIC19.25■□□□□ 0.67
RC3H1Q5TC82 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 AK6-201ENST00000380818 1183 ntTSL 2 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RC3H1Q5TC82 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms