Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 AP001505.2-201ENST00000616815 443 ntBASIC19.01■□□□□ 0.63
CCDC93Q567U6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC93Q567U6 LINC00554-201ENST00000564841 3011 ntBASIC19.01■□□□□ 0.63
CCDC93Q567U6 AC005052.1-201ENST00000625181 2492 ntBASIC19.01■□□□□ 0.63
CCDC93Q567U6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC93Q567U6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC93Q567U6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC93Q567U6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
CCDC93Q567U6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CCDC93Q567U6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC93Q567U6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC93Q567U6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC93Q567U6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19■□□□□ 0.63
CCDC93Q567U6 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
CCDC93Q567U6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC93Q567U6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC93Q567U6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC93Q567U6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC93Q567U6 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC93Q567U6 NDUFAB1P1-201ENST00000404262 460 ntBASIC19■□□□□ 0.63
CCDC93Q567U6 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19■□□□□ 0.63
CCDC93Q567U6 NKAIN1P1-201ENST00000435754 582 ntBASIC19■□□□□ 0.63
CCDC93Q567U6 AC253536.4-201ENST00000440539 267 ntBASIC19■□□□□ 0.63
CCDC93Q567U6 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19■□□□□ 0.63
CCDC93Q567U6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC93Q567U6 SPTLC1P5-201ENST00000450718 252 ntBASIC19■□□□□ 0.63
CCDC93Q567U6 LDHBP1-201ENST00000455730 1119 ntBASIC19■□□□□ 0.63
CCDC93Q567U6 SERPINA13P-202ENST00000478994 924 ntBASIC19■□□□□ 0.63
CCDC93Q567U6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19■□□□□ 0.63
CCDC93Q567U6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19■□□□□ 0.63
CCDC93Q567U6 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19■□□□□ 0.63
CCDC93Q567U6 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC93Q567U6 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
CCDC93Q567U6 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19■□□□□ 0.63
CCDC93Q567U6 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC19■□□□□ 0.63
CCDC93Q567U6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19■□□□□ 0.63
CCDC93Q567U6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC93Q567U6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19■□□□□ 0.63
CCDC93Q567U6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC93Q567U6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC93Q567U6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC93Q567U6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CCDC93Q567U6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19■□□□□ 0.63
CCDC93Q567U6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19■□□□□ 0.63
CCDC93Q567U6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19■□□□□ 0.63
CCDC93Q567U6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
CCDC93Q567U6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19■□□□□ 0.63
CCDC93Q567U6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC93Q567U6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.99■□□□□ 0.63
CCDC93Q567U6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CCDC93Q567U6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC93Q567U6 AC148477.4-201ENST00000613430 1793 ntBASIC18.98■□□□□ 0.63
CCDC93Q567U6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC93Q567U6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms