Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.97□□□□□ -0.01
RSPO4Q2I0M5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 REEP5-205ENST00000504247 480 ntTSL 5 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 AL031713.1-201ENST00000564813 661 ntBASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RSPO4Q2I0M5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RSPO4Q2I0M5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RSPO4Q2I0M5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RSPO4Q2I0M5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
RSPO4Q2I0M5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.96□□□□□ -0.02
RSPO4Q2I0M5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.96□□□□□ -0.02
RSPO4Q2I0M5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
RSPO4Q2I0M5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 LINC01144-201ENST00000626198 1710 ntBASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 AC007787.1-201ENST00000588095 1583 ntBASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 AC105020.1-201ENST00000435356 2205 ntBASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 GAPDHP40-201ENST00000505218 1006 ntBASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 OR10B1P-201ENST00000601666 907 ntBASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 AC073413.1-201ENST00000603927 732 ntBASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 AC242376.2-201ENST00000619355 883 ntBASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 FO393412.1-201ENST00000619841 382 ntBASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 AC004899.1-201ENST00000424687 1714 ntBASIC14.95□□□□□ -0.02
RSPO4Q2I0M5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms