Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX4P78413 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX4P78413 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.33■□□□□ 0.2
IRX4P78413 AC006058.4-201ENST00000624016 1670 ntBASIC16.33■□□□□ 0.2
IRX4P78413 AC069224.1-201ENST00000566372 1715 ntBASIC16.33■□□□□ 0.2
IRX4P78413 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX4P78413 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX4P78413 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
IRX4P78413 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.33■□□□□ 0.2
IRX4P78413 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.32■□□□□ 0.2
IRX4P78413 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
IRX4P78413 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
IRX4P78413 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.32■□□□□ 0.2
IRX4P78413 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.32■□□□□ 0.2
IRX4P78413 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.32■□□□□ 0.2
IRX4P78413 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 AC079776.1-201ENST00000401540 1152 ntBASIC16.32■□□□□ 0.2
IRX4P78413 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.32■□□□□ 0.2
IRX4P78413 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.32■□□□□ 0.2
IRX4P78413 DFFBP1-201ENST00000433250 979 ntBASIC16.32■□□□□ 0.2
IRX4P78413 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.32■□□□□ 0.2
IRX4P78413 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.32■□□□□ 0.2
IRX4P78413 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.32■□□□□ 0.2
IRX4P78413 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.32■□□□□ 0.2
IRX4P78413 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.32■□□□□ 0.2
IRX4P78413 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.32■□□□□ 0.2
IRX4P78413 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.32■□□□□ 0.2
IRX4P78413 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.32■□□□□ 0.2
IRX4P78413 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
IRX4P78413 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.32■□□□□ 0.2
IRX4P78413 AC005622.1-201ENST00000636801 1703 ntBASIC16.32■□□□□ 0.2
IRX4P78413 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
IRX4P78413 LINC02228-204ENST00000642115 2962 ntBASIC16.32■□□□□ 0.2
IRX4P78413 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.32■□□□□ 0.2
IRX4P78413 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IRX4P78413 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
IRX4P78413 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX4P78413 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX4P78413 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.31■□□□□ 0.2
IRX4P78413 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.31■□□□□ 0.2
IRX4P78413 AC022532.1-201ENST00000624563 1728 ntBASIC16.31■□□□□ 0.2
IRX4P78413 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.31■□□□□ 0.2
IRX4P78413 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
IRX4P78413 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
IRX4P78413 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
IRX4P78413 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.31■□□□□ 0.2
IRX4P78413 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
IRX4P78413 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.31■□□□□ 0.2
IRX4P78413 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX4P78413 AC087499.6-201ENST00000411576 835 ntBASIC16.31■□□□□ 0.2
IRX4P78413 AC011495.1-201ENST00000498085 584 ntBASIC16.31■□□□□ 0.2
IRX4P78413 PRYP6-201ENST00000514804 343 ntBASIC16.31■□□□□ 0.2
IRX4P78413 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.31■□□□□ 0.2
IRX4P78413 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX4P78413 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
IRX4P78413 CHCHD2P3-201ENST00000603038 451 ntBASIC16.31■□□□□ 0.2
IRX4P78413 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.31■□□□□ 0.2
IRX4P78413 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 MIR6805-201ENST00000615055 62 ntBASIC16.31■□□□□ 0.2
IRX4P78413 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.31■□□□□ 0.2
IRX4P78413 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX4P78413 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.31■□□□□ 0.2
IRX4P78413 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 OR2I1P-210ENST00000642037 4691 ntBASIC16.31■□□□□ 0.2
IRX4P78413 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX4P78413 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.31■□□□□ 0.2
IRX4P78413 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IRX4P78413 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms