Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 AC008267.7-201ENST00000624570 1194 ntBASIC13.76□□□□□ -0.21
SEC61A1P61619 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.76□□□□□ -0.21
SEC61A1P61619 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.76□□□□□ -0.21
SEC61A1P61619 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.76□□□□□ -0.21
SEC61A1P61619 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.76□□□□□ -0.21
SEC61A1P61619 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.76□□□□□ -0.21
SEC61A1P61619 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SEC61A1P61619 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SEC61A1P61619 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SEC61A1P61619 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SEC61A1P61619 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.75□□□□□ -0.21
SEC61A1P61619 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SEC61A1P61619 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.75□□□□□ -0.21
SEC61A1P61619 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.75□□□□□ -0.21
SEC61A1P61619 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SEC61A1P61619 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.75□□□□□ -0.21
SEC61A1P61619 KRT18P34-201ENST00000488218 1270 ntBASIC13.75□□□□□ -0.21
SEC61A1P61619 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.75□□□□□ -0.21
SEC61A1P61619 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.75□□□□□ -0.21
SEC61A1P61619 KRT8P23-201ENST00000560090 1207 ntBASIC13.75□□□□□ -0.21
SEC61A1P61619 AC025678.2-201ENST00000562061 970 ntBASIC13.75□□□□□ -0.21
SEC61A1P61619 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.75□□□□□ -0.21
SEC61A1P61619 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.75□□□□□ -0.21
SEC61A1P61619 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SEC61A1P61619 AC093512.1-201ENST00000617969 520 ntBASIC13.75□□□□□ -0.21
SEC61A1P61619 AC005912.2-201ENST00000619492 2400 ntBASIC13.75□□□□□ -0.21
SEC61A1P61619 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.75□□□□□ -0.21
SEC61A1P61619 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
SEC61A1P61619 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.75□□□□□ -0.21
SEC61A1P61619 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SEC61A1P61619 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SEC61A1P61619 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.75□□□□□ -0.21
SEC61A1P61619 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SEC61A1P61619 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SEC61A1P61619 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SEC61A1P61619 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SEC61A1P61619 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SEC61A1P61619 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
SEC61A1P61619 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 AL390755.1-201ENST00000623716 2027 ntBASIC13.74□□□□□ -0.21
SEC61A1P61619 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.74□□□□□ -0.21
SEC61A1P61619 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SEC61A1P61619 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 AC005622.1-201ENST00000636801 1703 ntBASIC13.74□□□□□ -0.21
SEC61A1P61619 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.74□□□□□ -0.21
SEC61A1P61619 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.74□□□□□ -0.21
SEC61A1P61619 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.74□□□□□ -0.21
SEC61A1P61619 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SEC61A1P61619 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.74□□□□□ -0.21
SEC61A1P61619 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
SEC61A1P61619 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.74□□□□□ -0.21
SEC61A1P61619 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.74□□□□□ -0.21
SEC61A1P61619 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SEC61A1P61619 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.74□□□□□ -0.21
SEC61A1P61619 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SEC61A1P61619 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.74□□□□□ -0.21
SEC61A1P61619 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms