Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.42■□□□□ 0.06
SRP54P61011 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.42■□□□□ 0.06
SRP54P61011 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.42■□□□□ 0.06
SRP54P61011 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.42■□□□□ 0.06
SRP54P61011 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
SRP54P61011 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SRP54P61011 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.42■□□□□ 0.06
SRP54P61011 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SRP54P61011 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.41■□□□□ 0.06
SRP54P61011 LINC02447-202ENST00000501888 2146 ntBASIC15.41■□□□□ 0.06
SRP54P61011 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SRP54P61011 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.41■□□□□ 0.06
SRP54P61011 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
SRP54P61011 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.41■□□□□ 0.06
SRP54P61011 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.41■□□□□ 0.06
SRP54P61011 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SRP54P61011 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 C1QBPP1-201ENST00000400117 770 ntBASIC15.41■□□□□ 0.06
SRP54P61011 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.41■□□□□ 0.06
SRP54P61011 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.41■□□□□ 0.06
SRP54P61011 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.41■□□□□ 0.06
SRP54P61011 AC120045.2-201ENST00000567334 178 ntBASIC15.41■□□□□ 0.06
SRP54P61011 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.41■□□□□ 0.06
SRP54P61011 AC124283.3-201ENST00000570869 594 ntBASIC15.41■□□□□ 0.06
SRP54P61011 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.41■□□□□ 0.06
SRP54P61011 MIR6752-201ENST00000618442 71 ntBASIC15.41■□□□□ 0.06
SRP54P61011 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SRP54P61011 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.41■□□□□ 0.06
SRP54P61011 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.41■□□□□ 0.06
SRP54P61011 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.41■□□□□ 0.06
SRP54P61011 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
SRP54P61011 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.41■□□□□ 0.06
SRP54P61011 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP54P61011 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
SRP54P61011 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SRP54P61011 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.4■□□□□ 0.06
SRP54P61011 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.4■□□□□ 0.06
SRP54P61011 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SRP54P61011 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SRP54P61011 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.4■□□□□ 0.06
SRP54P61011 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP54P61011 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SRP54P61011 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.4■□□□□ 0.06
SRP54P61011 AL133267.1-201ENST00000398220 340 ntBASIC15.4■□□□□ 0.06
SRP54P61011 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.4■□□□□ 0.06
SRP54P61011 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.4■□□□□ 0.06
SRP54P61011 ACTG1P3-201ENST00000431775 1114 ntBASIC15.4■□□□□ 0.06
SRP54P61011 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.4■□□□□ 0.06
SRP54P61011 AC234783.1-201ENST00000441761 496 ntBASIC15.4■□□□□ 0.06
SRP54P61011 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.4■□□□□ 0.06
SRP54P61011 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.4■□□□□ 0.06
SRP54P61011 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.4■□□□□ 0.06
SRP54P61011 BTNL10-201ENST00000595971 695 ntBASIC15.4■□□□□ 0.06
SRP54P61011 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms