Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.45□□□□□ -0.26
AP3S2P59780 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
AP3S2P59780 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
AP3S2P59780 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.45□□□□□ -0.26
AP3S2P59780 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.45□□□□□ -0.26
AP3S2P59780 AL589702.1-201ENST00000641229 1509 ntBASIC13.45□□□□□ -0.26
AP3S2P59780 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.45□□□□□ -0.26
AP3S2P59780 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
AP3S2P59780 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.45□□□□□ -0.26
AP3S2P59780 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.45□□□□□ -0.26
AP3S2P59780 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.45□□□□□ -0.26
AP3S2P59780 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.45□□□□□ -0.26
AP3S2P59780 LINC00265-3P-201ENST00000447588 903 ntBASIC13.45□□□□□ -0.26
AP3S2P59780 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
AP3S2P59780 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.45□□□□□ -0.26
AP3S2P59780 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.45□□□□□ -0.26
AP3S2P59780 AC106795.1-205ENST00000512851 1056 ntBASIC13.45□□□□□ -0.26
AP3S2P59780 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.45□□□□□ -0.26
AP3S2P59780 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.45□□□□□ -0.26
AP3S2P59780 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
AP3S2P59780 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.45□□□□□ -0.26
AP3S2P59780 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
AP3S2P59780 AP001269.4-201ENST00000609611 512 ntBASIC13.45□□□□□ -0.26
AP3S2P59780 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.45□□□□□ -0.26
AP3S2P59780 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
AP3S2P59780 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
AP3S2P59780 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.45□□□□□ -0.26
AP3S2P59780 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
AP3S2P59780 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S2P59780 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.45□□□□□ -0.26
AP3S2P59780 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
AP3S2P59780 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.45□□□□□ -0.26
AP3S2P59780 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
AP3S2P59780 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
AP3S2P59780 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.45□□□□□ -0.26
AP3S2P59780 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.45□□□□□ -0.26
AP3S2P59780 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.44□□□□□ -0.26
AP3S2P59780 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
AP3S2P59780 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
AP3S2P59780 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
AP3S2P59780 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.44□□□□□ -0.26
AP3S2P59780 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 ACE3P-201ENST00000423435 1973 ntBASIC13.44□□□□□ -0.26
AP3S2P59780 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.44□□□□□ -0.26
AP3S2P59780 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
AP3S2P59780 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.44□□□□□ -0.26
AP3S2P59780 RBM17P3-201ENST00000417687 1192 ntBASIC13.44□□□□□ -0.26
AP3S2P59780 TSSC2-201ENST00000450217 709 ntBASIC13.44□□□□□ -0.26
AP3S2P59780 KRT18P34-201ENST00000488218 1270 ntBASIC13.44□□□□□ -0.26
AP3S2P59780 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.44□□□□□ -0.26
AP3S2P59780 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
AP3S2P59780 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
AP3S2P59780 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 AC113367.3-201ENST00000508316 1912 ntBASIC13.44□□□□□ -0.26
AP3S2P59780 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
AP3S2P59780 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms