Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CLDN12P56749 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.63□□□□□ -0.23
CLDN12P56749 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN12P56749 UNC93B7-201ENST00000509439 705 ntBASIC13.63□□□□□ -0.23
CLDN12P56749 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.63□□□□□ -0.23
CLDN12P56749 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.63□□□□□ -0.23
CLDN12P56749 AC096734.2-201ENST00000562054 433 ntBASIC13.63□□□□□ -0.23
CLDN12P56749 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN12P56749 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.63□□□□□ -0.23
CLDN12P56749 AC061975.2-201ENST00000581722 295 ntBASIC13.63□□□□□ -0.23
CLDN12P56749 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDN12P56749 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
CLDN12P56749 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CLDN12P56749 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CLDN12P56749 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CLDN12P56749 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 C8orf49-201ENST00000525043 1968 ntBASIC13.63□□□□□ -0.23
CLDN12P56749 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN12P56749 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
CLDN12P56749 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CLDN12P56749 AC079781.5-202ENST00000641784 3743 ntBASIC13.63□□□□□ -0.23
CLDN12P56749 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN12P56749 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDN12P56749 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN12P56749 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CLDN12P56749 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN12P56749 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CLDN12P56749 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
CLDN12P56749 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CLDN12P56749 AL136982.4-201ENST00000437689 1740 ntBASIC13.62□□□□□ -0.23
CLDN12P56749 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.62□□□□□ -0.23
CLDN12P56749 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
CLDN12P56749 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN12P56749 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.62□□□□□ -0.23
CLDN12P56749 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN12P56749 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN12P56749 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CLDN12P56749 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLDN12P56749 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CLDN12P56749 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN12P56749 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.62□□□□□ -0.23
CLDN12P56749 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.62□□□□□ -0.23
CLDN12P56749 RHOQP3-201ENST00000437982 621 ntBASIC13.62□□□□□ -0.23
CLDN12P56749 AC098831.1-202ENST00000438821 336 ntBASIC13.62□□□□□ -0.23
CLDN12P56749 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN12P56749 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.62□□□□□ -0.23
CLDN12P56749 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CLDN12P56749 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.62□□□□□ -0.23
CLDN12P56749 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.62□□□□□ -0.23
CLDN12P56749 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN12P56749 AL138918.1-201ENST00000568306 659 ntBASIC13.62□□□□□ -0.23
CLDN12P56749 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.62□□□□□ -0.23
CLDN12P56749 AL049840.3-201ENST00000602669 611 ntBASIC13.62□□□□□ -0.23
CLDN12P56749 AC023141.13-201ENST00000604991 943 ntBASIC13.62□□□□□ -0.23
CLDN12P56749 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.62□□□□□ -0.23
CLDN12P56749 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN12P56749 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLDN12P56749 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CLDN12P56749 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.62□□□□□ -0.23
CLDN12P56749 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN12P56749 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN12P56749 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CLDN12P56749 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN12P56749 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN12P56749 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN12P56749 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.61□□□□□ -0.23
CLDN12P56749 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms