Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 AC073347.1-201ENST00000421633 2643 ntBASIC14.08□□□□□ -0.16
SUMO3P55854 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SUMO3P55854 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.07□□□□□ -0.16
SUMO3P55854 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SUMO3P55854 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.07□□□□□ -0.16
SUMO3P55854 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.07□□□□□ -0.16
SUMO3P55854 AC046158.3-201ENST00000624947 2558 ntBASIC14.07□□□□□ -0.16
SUMO3P55854 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.07□□□□□ -0.16
SUMO3P55854 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
SUMO3P55854 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.07□□□□□ -0.16
SUMO3P55854 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.07□□□□□ -0.16
SUMO3P55854 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.07□□□□□ -0.16
SUMO3P55854 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SUMO3P55854 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SUMO3P55854 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.07□□□□□ -0.16
SUMO3P55854 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SUMO3P55854 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 AC004066.1-201ENST00000502488 802 ntBASIC14.07□□□□□ -0.16
SUMO3P55854 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.07□□□□□ -0.16
SUMO3P55854 AC123567.1-201ENST00000548294 1261 ntBASIC14.07□□□□□ -0.16
SUMO3P55854 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.07□□□□□ -0.16
SUMO3P55854 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.07□□□□□ -0.16
SUMO3P55854 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.07□□□□□ -0.16
SUMO3P55854 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.07□□□□□ -0.16
SUMO3P55854 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.07□□□□□ -0.16
SUMO3P55854 AC092364.2-202ENST00000597012 1073 ntBASIC14.07□□□□□ -0.16
SUMO3P55854 AC093813.1-201ENST00000605066 256 ntBASIC14.07□□□□□ -0.16
SUMO3P55854 AL662799.1-202ENST00000614205 422 ntBASIC14.07□□□□□ -0.16
SUMO3P55854 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SUMO3P55854 MROH4P-201ENST00000431302 1578 ntBASIC14.07□□□□□ -0.16
SUMO3P55854 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.07□□□□□ -0.16
SUMO3P55854 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.07□□□□□ -0.16
SUMO3P55854 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.07□□□□□ -0.16
SUMO3P55854 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SUMO3P55854 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
SUMO3P55854 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SUMO3P55854 WASH3P-207ENST00000560956 1394 ntBASIC14.07□□□□□ -0.16
SUMO3P55854 PKD1P5-201ENST00000532415 10291 ntBASIC14.07□□□□□ -0.16
SUMO3P55854 AC063926.3-201ENST00000624734 5658 ntBASIC14.07□□□□□ -0.16
SUMO3P55854 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.07□□□□□ -0.16
SUMO3P55854 INTS4P2-202ENST00000614726 2019 ntBASIC14.07□□□□□ -0.16
SUMO3P55854 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.07□□□□□ -0.16
SUMO3P55854 DRD5P1-201ENST00000456605 1438 ntBASIC14.07□□□□□ -0.16
SUMO3P55854 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SUMO3P55854 AC023157.3-201ENST00000619086 2088 ntBASIC14.06□□□□□ -0.16
SUMO3P55854 AC138035.3-201ENST00000622706 2791 ntBASIC14.06□□□□□ -0.16
SUMO3P55854 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SUMO3P55854 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.06□□□□□ -0.16
SUMO3P55854 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SUMO3P55854 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 AC006486.2-201ENST00000624246 2199 ntBASIC14.06□□□□□ -0.16
SUMO3P55854 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
SUMO3P55854 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.06□□□□□ -0.16
SUMO3P55854 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SUMO3P55854 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.06□□□□□ -0.16
SUMO3P55854 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SUMO3P55854 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SUMO3P55854 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
SUMO3P55854 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.06□□□□□ -0.16
SUMO3P55854 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.06□□□□□ -0.16
SUMO3P55854 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.06□□□□□ -0.16
SUMO3P55854 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.06□□□□□ -0.16
SUMO3P55854 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms