Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.42□□□□□ -0.58
APOC4P55056 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.42□□□□□ -0.58
APOC4P55056 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
APOC4P55056 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC11.42□□□□□ -0.58
APOC4P55056 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC11.42□□□□□ -0.58
APOC4P55056 ATP5G2P4-201ENST00000442175 420 ntBASIC11.42□□□□□ -0.58
APOC4P55056 AL355864.2-201ENST00000447420 863 ntBASIC11.42□□□□□ -0.58
APOC4P55056 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC11.42□□□□□ -0.58
APOC4P55056 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 TDH-203ENST00000531764 1110 ntBASIC11.42□□□□□ -0.58
APOC4P55056 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.42□□□□□ -0.58
APOC4P55056 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.42□□□□□ -0.58
APOC4P55056 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.42□□□□□ -0.58
APOC4P55056 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.42□□□□□ -0.58
APOC4P55056 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
APOC4P55056 APOC4-201ENST00000591600 348 ntTSL 3 BASIC11.42□□□□□ -0.58
APOC4P55056 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.42□□□□□ -0.58
APOC4P55056 AL022328.1-201ENST00000610050 478 ntBASIC11.42□□□□□ -0.58
APOC4P55056 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.42□□□□□ -0.58
APOC4P55056 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
APOC4P55056 AL118508.1-201ENST00000613502 2345 ntBASIC11.42□□□□□ -0.58
APOC4P55056 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.42□□□□□ -0.58
APOC4P55056 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
APOC4P55056 AC067750.1-201ENST00000608826 6545 ntBASIC11.42□□□□□ -0.58
APOC4P55056 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
APOC4P55056 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC11.41□□□□□ -0.58
APOC4P55056 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC11.41□□□□□ -0.58
APOC4P55056 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
APOC4P55056 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
APOC4P55056 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.41□□□□□ -0.58
APOC4P55056 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
APOC4P55056 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.41□□□□□ -0.58
APOC4P55056 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.41□□□□□ -0.58
APOC4P55056 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.41□□□□□ -0.58
APOC4P55056 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
APOC4P55056 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.41□□□□□ -0.58
APOC4P55056 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
APOC4P55056 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 MGST3-203ENST00000367885 680 ntTSL 2 BASIC11.41□□□□□ -0.58
APOC4P55056 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.41□□□□□ -0.58
APOC4P55056 ACTG1P3-201ENST00000431775 1114 ntBASIC11.41□□□□□ -0.58
APOC4P55056 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
APOC4P55056 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC11.41□□□□□ -0.58
APOC4P55056 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
APOC4P55056 IGHV3-71-201ENST00000523324 359 ntBASIC11.41□□□□□ -0.58
APOC4P55056 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.41□□□□□ -0.58
APOC4P55056 KRT17P8-201ENST00000540749 863 ntBASIC11.41□□□□□ -0.58
APOC4P55056 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.41□□□□□ -0.58
APOC4P55056 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC11.41□□□□□ -0.58
APOC4P55056 AP001063.1-201ENST00000568332 529 ntBASIC11.41□□□□□ -0.58
APOC4P55056 AC124283.3-201ENST00000570869 594 ntBASIC11.41□□□□□ -0.58
APOC4P55056 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC11.41□□□□□ -0.58
APOC4P55056 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.41□□□□□ -0.58
APOC4P55056 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
APOC4P55056 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
APOC4P55056 AL139384.1-201ENST00000612143 3047 ntBASIC11.41□□□□□ -0.58
APOC4P55056 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.41□□□□□ -0.58
APOC4P55056 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms