Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 KRT43P-201ENST00000434019 910 ntBASIC17.16■□□□□ 0.34
GPC3P51654 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.16■□□□□ 0.34
GPC3P51654 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.16■□□□□ 0.34
GPC3P51654 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.16■□□□□ 0.34
GPC3P51654 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
GPC3P51654 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.16■□□□□ 0.34
GPC3P51654 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.16■□□□□ 0.34
GPC3P51654 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.16■□□□□ 0.34
GPC3P51654 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.16■□□□□ 0.34
GPC3P51654 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.16■□□□□ 0.34
GPC3P51654 AC107373.2-201ENST00000607735 490 ntBASIC17.16■□□□□ 0.34
GPC3P51654 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.16■□□□□ 0.34
GPC3P51654 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC3P51654 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GPC3P51654 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.16■□□□□ 0.34
GPC3P51654 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC3P51654 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GPC3P51654 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC3P51654 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GPC3P51654 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GPC3P51654 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC3P51654 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC3P51654 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.16■□□□□ 0.34
GPC3P51654 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GPC3P51654 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.15■□□□□ 0.34
GPC3P51654 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC3P51654 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GPC3P51654 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 CICP13-201ENST00000422015 2789 ntBASIC17.15■□□□□ 0.34
GPC3P51654 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
GPC3P51654 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GPC3P51654 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
GPC3P51654 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC3P51654 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.15■□□□□ 0.34
GPC3P51654 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC3P51654 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC3P51654 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 GAPDHP40-201ENST00000505218 1006 ntBASIC17.15■□□□□ 0.34
GPC3P51654 AP001889.1-201ENST00000525414 633 ntBASIC17.15■□□□□ 0.34
GPC3P51654 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.15■□□□□ 0.34
GPC3P51654 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC3P51654 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC3P51654 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GPC3P51654 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.15■□□□□ 0.34
GPC3P51654 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.15■□□□□ 0.34
GPC3P51654 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.15■□□□□ 0.34
GPC3P51654 AL022328.1-201ENST00000610050 478 ntBASIC17.15■□□□□ 0.34
GPC3P51654 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.15■□□□□ 0.34
GPC3P51654 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.15■□□□□ 0.34
GPC3P51654 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GPC3P51654 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC3P51654 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC3P51654 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.15■□□□□ 0.34
GPC3P51654 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC3P51654 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GPC3P51654 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC3P51654 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GPC3P51654 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.15■□□□□ 0.34
GPC3P51654 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
GPC3P51654 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
GPC3P51654 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.14■□□□□ 0.33
GPC3P51654 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 AC020658.6-201ENST00000623564 1870 ntBASIC17.14■□□□□ 0.33
GPC3P51654 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.14■□□□□ 0.33
GPC3P51654 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.14■□□□□ 0.33
GPC3P51654 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 MSTO2P-201ENST00000314835 1709 ntBASIC17.14■□□□□ 0.33
GPC3P51654 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GPC3P51654 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.14■□□□□ 0.33
GPC3P51654 AC005229.1-201ENST00000392885 409 ntBASIC17.14■□□□□ 0.33
GPC3P51654 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.14■□□□□ 0.33
GPC3P51654 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.14■□□□□ 0.33
GPC3P51654 BCRP2-202ENST00000447763 634 ntBASIC17.14■□□□□ 0.33
GPC3P51654 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.14■□□□□ 0.33
GPC3P51654 BCRP6-201ENST00000510112 632 ntBASIC17.14■□□□□ 0.33
GPC3P51654 BCRP7-201ENST00000511549 544 ntBASIC17.14■□□□□ 0.33
GPC3P51654 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.14■□□□□ 0.33
GPC3P51654 AP001063.1-201ENST00000568332 529 ntBASIC17.14■□□□□ 0.33
GPC3P51654 AC009486.1-201ENST00000569860 813 ntBASIC17.14■□□□□ 0.33
GPC3P51654 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms