Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
KRT6CP48668 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
KRT6CP48668 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT6CP48668 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
KRT6CP48668 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
KRT6CP48668 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 RPL5P21-201ENST00000404620 815 ntBASIC15.18■□□□□ 0.02
KRT6CP48668 SPDYE7P-202ENST00000420373 878 ntBASIC15.18■□□□□ 0.02
KRT6CP48668 UPF3AP3-201ENST00000420996 769 ntBASIC15.18■□□□□ 0.02
KRT6CP48668 MTND6P24-201ENST00000440466 518 ntBASIC15.18■□□□□ 0.02
KRT6CP48668 AC023141.5-201ENST00000458585 616 ntBASIC15.18■□□□□ 0.02
KRT6CP48668 AC112482.1-201ENST00000492080 688 ntBASIC15.18■□□□□ 0.02
KRT6CP48668 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.18■□□□□ 0.02
KRT6CP48668 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.18■□□□□ 0.02
KRT6CP48668 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT6CP48668 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.18■□□□□ 0.02
KRT6CP48668 KRT8P12-202ENST00000472924 1397 ntBASIC15.18■□□□□ 0.02
KRT6CP48668 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT6CP48668 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.18■□□□□ 0.02
KRT6CP48668 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT6CP48668 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT6CP48668 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT6CP48668 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT6CP48668 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.17■□□□□ 0.02
KRT6CP48668 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KRT6CP48668 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.17■□□□□ 0.02
KRT6CP48668 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT6CP48668 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
KRT6CP48668 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT6CP48668 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
KRT6CP48668 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KRT6CP48668 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT6CP48668 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
KRT6CP48668 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT6CP48668 RPSAP43-201ENST00000402237 625 ntBASIC15.17■□□□□ 0.02
KRT6CP48668 AC211486.1-202ENST00000416371 468 ntBASIC15.17■□□□□ 0.02
KRT6CP48668 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT6CP48668 AP000347.1-202ENST00000435868 847 ntBASIC15.17■□□□□ 0.02
KRT6CP48668 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT6CP48668 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT6CP48668 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT6CP48668 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 AC211476.1-201ENST00000503899 468 ntBASIC15.17■□□□□ 0.02
KRT6CP48668 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT6CP48668 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT6CP48668 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
KRT6CP48668 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT6CP48668 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT6CP48668 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT6CP48668 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 AL133215.2-201ENST00000609242 977 ntBASIC15.17■□□□□ 0.02
KRT6CP48668 MIR6080-201ENST00000617359 66 ntBASIC15.17■□□□□ 0.02
KRT6CP48668 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
KRT6CP48668 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT6CP48668 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
KRT6CP48668 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT6CP48668 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT6CP48668 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
KRT6CP48668 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT6CP48668 CICP4-201ENST00000447359 2812 ntBASIC15.16■□□□□ 0.02
KRT6CP48668 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT6CP48668 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms