Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.69■□□□□ 0.26
SSR1P43307 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SSR1P43307 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.69■□□□□ 0.26
SSR1P43307 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SSR1P43307 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
SSR1P43307 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.69■□□□□ 0.26
SSR1P43307 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
SSR1P43307 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSR1P43307 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.69■□□□□ 0.26
SSR1P43307 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSR1P43307 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.68■□□□□ 0.26
SSR1P43307 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSR1P43307 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.68■□□□□ 0.26
SSR1P43307 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSR1P43307 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSR1P43307 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
SSR1P43307 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.68■□□□□ 0.26
SSR1P43307 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.68■□□□□ 0.26
SSR1P43307 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
SSR1P43307 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSR1P43307 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.68■□□□□ 0.26
SSR1P43307 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.68■□□□□ 0.26
SSR1P43307 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
SSR1P43307 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSR1P43307 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSR1P43307 AC004461.1-201ENST00000412461 403 ntBASIC16.68■□□□□ 0.26
SSR1P43307 FAM58DP-201ENST00000428076 619 ntBASIC16.68■□□□□ 0.26
SSR1P43307 RBPMS2P1-201ENST00000437762 623 ntBASIC16.68■□□□□ 0.26
SSR1P43307 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.68■□□□□ 0.26
SSR1P43307 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.68■□□□□ 0.26
SSR1P43307 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.68■□□□□ 0.26
SSR1P43307 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.68■□□□□ 0.26
SSR1P43307 MIR4313-201ENST00000580760 101 ntBASIC16.68■□□□□ 0.26
SSR1P43307 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.68■□□□□ 0.26
SSR1P43307 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSR1P43307 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.68■□□□□ 0.26
SSR1P43307 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.68■□□□□ 0.26
SSR1P43307 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.68■□□□□ 0.26
SSR1P43307 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSR1P43307 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSR1P43307 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSR1P43307 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.68■□□□□ 0.26
SSR1P43307 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
SSR1P43307 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SSR1P43307 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.68■□□□□ 0.26
SSR1P43307 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.68■□□□□ 0.26
SSR1P43307 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.68■□□□□ 0.26
SSR1P43307 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSR1P43307 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SSR1P43307 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SSR1P43307 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSR1P43307 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
SSR1P43307 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSR1P43307 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.68■□□□□ 0.26
SSR1P43307 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
SSR1P43307 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SSR1P43307 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC16.67■□□□□ 0.26
SSR1P43307 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SSR1P43307 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
SSR1P43307 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.67■□□□□ 0.26
SSR1P43307 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.67■□□□□ 0.26
SSR1P43307 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.67■□□□□ 0.26
SSR1P43307 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.67■□□□□ 0.26
SSR1P43307 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 PHKG1P2-201ENST00000457537 863 ntBASIC16.67■□□□□ 0.26
SSR1P43307 AC112482.1-201ENST00000492080 688 ntBASIC16.67■□□□□ 0.26
SSR1P43307 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.67■□□□□ 0.26
SSR1P43307 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 AC092865.5-201ENST00000545435 363 ntBASIC16.67■□□□□ 0.26
SSR1P43307 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.67■□□□□ 0.26
SSR1P43307 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.67■□□□□ 0.26
SSR1P43307 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.67■□□□□ 0.26
SSR1P43307 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.67■□□□□ 0.26
SSR1P43307 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms