Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
PBX3P40426 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
PBX3P40426 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PBX3P40426 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PBX3P40426 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PBX3P40426 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.54■□□□□ 0.24
PBX3P40426 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.54■□□□□ 0.24
PBX3P40426 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
PBX3P40426 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PBX3P40426 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PBX3P40426 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.54■□□□□ 0.24
PBX3P40426 BTBD6P1-201ENST00000412176 1267 ntBASIC16.54■□□□□ 0.24
PBX3P40426 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.54■□□□□ 0.24
PBX3P40426 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.54■□□□□ 0.24
PBX3P40426 HOMER2P2-201ENST00000451621 847 ntBASIC16.54■□□□□ 0.24
PBX3P40426 AL591846.1-201ENST00000451736 433 ntBASIC16.54■□□□□ 0.24
PBX3P40426 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.54■□□□□ 0.24
PBX3P40426 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PBX3P40426 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.54■□□□□ 0.24
PBX3P40426 AP001258.2-201ENST00000529891 490 ntBASIC16.54■□□□□ 0.24
PBX3P40426 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.54■□□□□ 0.24
PBX3P40426 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.54■□□□□ 0.24
PBX3P40426 AL008638.5-201ENST00000623814 1298 ntBASIC16.54■□□□□ 0.24
PBX3P40426 AC132938.4-201ENST00000623835 848 ntBASIC16.54■□□□□ 0.24
PBX3P40426 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.54■□□□□ 0.24
PBX3P40426 AC006453.4-201ENST00000636949 1252 ntBASIC16.54■□□□□ 0.24
PBX3P40426 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.54■□□□□ 0.24
PBX3P40426 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PBX3P40426 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PBX3P40426 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PBX3P40426 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.54■□□□□ 0.24
PBX3P40426 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.53■□□□□ 0.24
PBX3P40426 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PBX3P40426 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PBX3P40426 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PBX3P40426 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PBX3P40426 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PBX3P40426 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PBX3P40426 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PBX3P40426 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PBX3P40426 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PBX3P40426 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PBX3P40426 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PBX3P40426 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.53■□□□□ 0.24
PBX3P40426 ACTBP8-201ENST00000403258 1108 ntBASIC16.53■□□□□ 0.24
PBX3P40426 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.53■□□□□ 0.24
PBX3P40426 MTX1P1-201ENST00000440904 838 ntBASIC16.53■□□□□ 0.24
PBX3P40426 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.53■□□□□ 0.24
PBX3P40426 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
PBX3P40426 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.53■□□□□ 0.24
PBX3P40426 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PBX3P40426 RPSAP36-202ENST00000494591 1261 ntBASIC16.53■□□□□ 0.24
PBX3P40426 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.53■□□□□ 0.24
PBX3P40426 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.53■□□□□ 0.24
PBX3P40426 AP006547.1-201ENST00000563435 692 ntBASIC16.53■□□□□ 0.24
PBX3P40426 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.53■□□□□ 0.24
PBX3P40426 AL021578.1-201ENST00000613646 709 ntBASIC16.53■□□□□ 0.24
PBX3P40426 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PBX3P40426 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PBX3P40426 AL513523.2-202ENST00000427283 2040 ntBASIC16.53■□□□□ 0.24
PBX3P40426 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.53■□□□□ 0.24
PBX3P40426 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PBX3P40426 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PBX3P40426 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PBX3P40426 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.53■□□□□ 0.24
PBX3P40426 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PBX3P40426 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.53■□□□□ 0.24
PBX3P40426 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PBX3P40426 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PBX3P40426 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PBX3P40426 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PBX3P40426 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PBX3P40426 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PBX3P40426 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PBX3P40426 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PBX3P40426 AC010491.1-201ENST00000563101 2797 ntBASIC16.52■□□□□ 0.24
PBX3P40426 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PBX3P40426 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.52■□□□□ 0.24
PBX3P40426 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.52■□□□□ 0.24
PBX3P40426 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PBX3P40426 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PBX3P40426 AL354989.2-201ENST00000435838 1540 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms