Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
SNCAP37840 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
SNCAP37840 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.91□□□□□ -0.34
SNCAP37840 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.91□□□□□ -0.34
SNCAP37840 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SNCAP37840 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.91□□□□□ -0.34
SNCAP37840 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.91□□□□□ -0.34
SNCAP37840 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.91□□□□□ -0.34
SNCAP37840 AC093724.1-201ENST00000448659 1027 ntBASIC12.91□□□□□ -0.34
SNCAP37840 AC245100.5-201ENST00000452108 331 ntBASIC12.91□□□□□ -0.34
SNCAP37840 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.91□□□□□ -0.34
SNCAP37840 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SNCAP37840 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.91□□□□□ -0.34
SNCAP37840 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.91□□□□□ -0.34
SNCAP37840 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.91□□□□□ -0.34
SNCAP37840 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SNCAP37840 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.91□□□□□ -0.34
SNCAP37840 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SNCAP37840 AC092127.1-201ENST00000567093 3455 ntBASIC12.91□□□□□ -0.34
SNCAP37840 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.91□□□□□ -0.34
SNCAP37840 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.91□□□□□ -0.34
SNCAP37840 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.91□□□□□ -0.34
SNCAP37840 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.91□□□□□ -0.34
SNCAP37840 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SNCAP37840 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
SNCAP37840 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.9□□□□□ -0.34
SNCAP37840 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 CICP20-201ENST00000443330 2801 ntBASIC12.9□□□□□ -0.34
SNCAP37840 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.9□□□□□ -0.34
SNCAP37840 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.9□□□□□ -0.34
SNCAP37840 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.9□□□□□ -0.34
SNCAP37840 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 AC004870.1-201ENST00000315132 882 ntBASIC12.9□□□□□ -0.34
SNCAP37840 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.9□□□□□ -0.34
SNCAP37840 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.9□□□□□ -0.34
SNCAP37840 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.9□□□□□ -0.34
SNCAP37840 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.9□□□□□ -0.34
SNCAP37840 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.9□□□□□ -0.34
SNCAP37840 AC109635.5-201ENST00000533593 962 ntBASIC12.9□□□□□ -0.34
SNCAP37840 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.9□□□□□ -0.34
SNCAP37840 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.9□□□□□ -0.34
SNCAP37840 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
SNCAP37840 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.9□□□□□ -0.34
SNCAP37840 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.9□□□□□ -0.34
SNCAP37840 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.9□□□□□ -0.34
SNCAP37840 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.9□□□□□ -0.34
SNCAP37840 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 REXO1L1P-202ENST00000608646 1974 ntBASIC12.9□□□□□ -0.34
SNCAP37840 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 AC140479.7-201ENST00000636301 2332 ntBASIC12.9□□□□□ -0.34
SNCAP37840 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SNCAP37840 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.9□□□□□ -0.34
SNCAP37840 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
SNCAP37840 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
SNCAP37840 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SNCAP37840 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNCAP37840 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms