Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HOXC8P31273 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.72■□□□□ 0.27
HOXC8P31273 RN7SKP175-201ENST00000408472 289 ntBASIC16.72■□□□□ 0.27
HOXC8P31273 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.72■□□□□ 0.27
HOXC8P31273 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.72■□□□□ 0.27
HOXC8P31273 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.72■□□□□ 0.27
HOXC8P31273 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC8P31273 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.72■□□□□ 0.27
HOXC8P31273 AC105129.2-201ENST00000559536 390 ntBASIC16.72■□□□□ 0.27
HOXC8P31273 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.72■□□□□ 0.27
HOXC8P31273 NDUFV2P1-201ENST00000596415 907 ntBASIC16.72■□□□□ 0.27
HOXC8P31273 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC8P31273 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC8P31273 AC138627.1-207ENST00000641560 1006 ntBASIC16.72■□□□□ 0.27
HOXC8P31273 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC8P31273 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC8P31273 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC8P31273 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC8P31273 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.72■□□□□ 0.27
HOXC8P31273 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HOXC8P31273 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC8P31273 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HOXC8P31273 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC8P31273 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HOXC8P31273 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC8P31273 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HOXC8P31273 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC8P31273 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HOXC8P31273 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.71■□□□□ 0.27
HOXC8P31273 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC8P31273 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.71■□□□□ 0.27
HOXC8P31273 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HOXC8P31273 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HOXC8P31273 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC8P31273 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC8P31273 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC8P31273 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC8P31273 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC8P31273 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC8P31273 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC8P31273 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.71■□□□□ 0.27
HOXC8P31273 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HOXC8P31273 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
HOXC8P31273 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.71■□□□□ 0.27
HOXC8P31273 AC138649.2-201ENST00000615886 705 ntBASIC16.71■□□□□ 0.27
HOXC8P31273 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.71■□□□□ 0.27
HOXC8P31273 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
HOXC8P31273 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.71■□□□□ 0.27
HOXC8P31273 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.71■□□□□ 0.27
HOXC8P31273 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.71■□□□□ 0.27
HOXC8P31273 PCDHB19P-201ENST00000570871 2371 ntBASIC16.71■□□□□ 0.26
HOXC8P31273 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
HOXC8P31273 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 REXO1L4P-201ENST00000605109 1937 ntBASIC16.7■□□□□ 0.26
HOXC8P31273 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.7■□□□□ 0.26
HOXC8P31273 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HOXC8P31273 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.7■□□□□ 0.26
HOXC8P31273 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.7■□□□□ 0.26
HOXC8P31273 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.7■□□□□ 0.26
HOXC8P31273 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.7■□□□□ 0.26
HOXC8P31273 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.7■□□□□ 0.26
HOXC8P31273 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HOXC8P31273 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 AL662890.1-201ENST00000396818 632 ntBASIC16.7■□□□□ 0.26
HOXC8P31273 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.7■□□□□ 0.26
HOXC8P31273 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.7■□□□□ 0.26
HOXC8P31273 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.7■□□□□ 0.26
HOXC8P31273 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.7■□□□□ 0.26
HOXC8P31273 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.7■□□□□ 0.26
HOXC8P31273 AL645939.5-201ENST00000606834 243 ntBASIC16.7■□□□□ 0.26
HOXC8P31273 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HOXC8P31273 AC138696.2-201ENST00000607376 223 ntBASIC16.7■□□□□ 0.26
HOXC8P31273 AL358472.3-201ENST00000608147 415 ntBASIC16.7■□□□□ 0.26
HOXC8P31273 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
HOXC8P31273 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.7■□□□□ 0.26
HOXC8P31273 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.7■□□□□ 0.26
HOXC8P31273 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.7■□□□□ 0.26
HOXC8P31273 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HOXC8P31273 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HOXC8P31273 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC8P31273 AC090616.6-203ENST00000579186 1945 ntBASIC16.7■□□□□ 0.26
HOXC8P31273 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms