Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TNFSF4P23510 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.4□□□□□ -0.26
TNFSF4P23510 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
TNFSF4P23510 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.4□□□□□ -0.26
TNFSF4P23510 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TNFSF4P23510 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TNFSF4P23510 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.39□□□□□ -0.27
TNFSF4P23510 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 OR2I1P-210ENST00000642037 4691 ntBASIC13.39□□□□□ -0.27
TNFSF4P23510 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TNFSF4P23510 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.39□□□□□ -0.27
TNFSF4P23510 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.39□□□□□ -0.27
TNFSF4P23510 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 SPDYE19P-201ENST00000338590 713 ntBASIC13.39□□□□□ -0.27
TNFSF4P23510 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 AC236430.1-201ENST00000402231 743 ntBASIC13.39□□□□□ -0.27
TNFSF4P23510 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.39□□□□□ -0.27
TNFSF4P23510 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.39□□□□□ -0.27
TNFSF4P23510 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.39□□□□□ -0.27
TNFSF4P23510 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.39□□□□□ -0.27
TNFSF4P23510 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.39□□□□□ -0.27
TNFSF4P23510 UGT1A2P-201ENST00000454886 866 ntBASIC13.39□□□□□ -0.27
TNFSF4P23510 SERBP1P5-201ENST00000510079 1181 ntBASIC13.39□□□□□ -0.27
TNFSF4P23510 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TNFSF4P23510 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.39□□□□□ -0.27
TNFSF4P23510 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.39□□□□□ -0.27
TNFSF4P23510 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.39□□□□□ -0.27
TNFSF4P23510 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.39□□□□□ -0.27
TNFSF4P23510 AC027307.3-201ENST00000594262 1100 ntBASIC13.39□□□□□ -0.27
TNFSF4P23510 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.39□□□□□ -0.27
TNFSF4P23510 AL391825.1-201ENST00000457671 1364 ntBASIC13.39□□□□□ -0.27
TNFSF4P23510 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.39□□□□□ -0.27
TNFSF4P23510 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.39□□□□□ -0.27
TNFSF4P23510 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.39□□□□□ -0.27
TNFSF4P23510 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.39□□□□□ -0.27
TNFSF4P23510 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TNFSF4P23510 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.39□□□□□ -0.27
TNFSF4P23510 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
TNFSF4P23510 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TNFSF4P23510 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
TNFSF4P23510 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.39□□□□□ -0.27
TNFSF4P23510 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.39□□□□□ -0.27
TNFSF4P23510 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TNFSF4P23510 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.39□□□□□ -0.27
TNFSF4P23510 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.39□□□□□ -0.27
TNFSF4P23510 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
TNFSF4P23510 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TNFSF4P23510 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.38□□□□□ -0.27
TNFSF4P23510 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TNFSF4P23510 C8orf49-201ENST00000525043 1968 ntBASIC13.38□□□□□ -0.27
TNFSF4P23510 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TNFSF4P23510 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 AC138969.3-201ENST00000546612 1459 ntBASIC13.38□□□□□ -0.27
TNFSF4P23510 AC138932.2-201ENST00000548268 1459 ntBASIC13.38□□□□□ -0.27
TNFSF4P23510 AC126755.4-201ENST00000549796 1459 ntBASIC13.38□□□□□ -0.27
TNFSF4P23510 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
TNFSF4P23510 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.38□□□□□ -0.27
TNFSF4P23510 PRAL-201ENST00000624952 3286 ntBASIC13.38□□□□□ -0.27
TNFSF4P23510 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms