Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 MEIS3P1-201ENST00000495167 958 ntBASIC16.76■□□□□ 0.27
CD58P19256 TPRX2P-201ENST00000535362 881 ntBASIC16.76■□□□□ 0.27
CD58P19256 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.76■□□□□ 0.27
CD58P19256 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
CD58P19256 AC023310.3-201ENST00000557027 670 ntBASIC16.76■□□□□ 0.27
CD58P19256 AC100756.1-201ENST00000562736 682 ntBASIC16.76■□□□□ 0.27
CD58P19256 AC138749.3-201ENST00000567691 622 ntBASIC16.76■□□□□ 0.27
CD58P19256 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.76■□□□□ 0.27
CD58P19256 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CD58P19256 AC116165.1-201ENST00000611806 668 ntBASIC16.76■□□□□ 0.27
CD58P19256 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD58P19256 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD58P19256 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD58P19256 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CD58P19256 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD58P19256 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CD58P19256 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CD58P19256 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CD58P19256 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD58P19256 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CD58P19256 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD58P19256 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD58P19256 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD58P19256 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CD58P19256 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CD58P19256 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.75■□□□□ 0.27
CD58P19256 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.75■□□□□ 0.27
CD58P19256 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.75■□□□□ 0.27
CD58P19256 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD58P19256 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD58P19256 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD58P19256 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CD58P19256 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD58P19256 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD58P19256 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.75■□□□□ 0.27
CD58P19256 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.75■□□□□ 0.27
CD58P19256 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.75■□□□□ 0.27
CD58P19256 SPTLC1P1-201ENST00000447199 261 ntBASIC16.75■□□□□ 0.27
CD58P19256 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.75■□□□□ 0.27
CD58P19256 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.75■□□□□ 0.27
CD58P19256 AL158212.4-201ENST00000624062 1286 ntBASIC16.75■□□□□ 0.27
CD58P19256 AC008761.3-201ENST00000624803 892 ntBASIC16.75■□□□□ 0.27
CD58P19256 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD58P19256 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.75■□□□□ 0.27
CD58P19256 AC022532.1-201ENST00000624563 1728 ntBASIC16.75■□□□□ 0.27
CD58P19256 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD58P19256 AL121723.1-201ENST00000445194 1519 ntBASIC16.75■□□□□ 0.27
CD58P19256 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CD58P19256 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CD58P19256 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CD58P19256 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CD58P19256 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.74■□□□□ 0.27
CD58P19256 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CD58P19256 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.74■□□□□ 0.27
CD58P19256 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CD58P19256 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CD58P19256 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CD58P19256 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CD58P19256 TOMM22P5-201ENST00000416399 439 ntBASIC16.74■□□□□ 0.27
CD58P19256 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.74■□□□□ 0.27
CD58P19256 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.74■□□□□ 0.27
CD58P19256 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.74■□□□□ 0.27
CD58P19256 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.74■□□□□ 0.27
CD58P19256 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.74■□□□□ 0.27
CD58P19256 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.74■□□□□ 0.27
CD58P19256 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.74■□□□□ 0.27
CD58P19256 AC004233.3-201ENST00000607794 1269 ntBASIC16.74■□□□□ 0.27
CD58P19256 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.74■□□□□ 0.27
CD58P19256 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CD58P19256 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.74■□□□□ 0.27
CD58P19256 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.74■□□□□ 0.27
CD58P19256 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.74■□□□□ 0.27
CD58P19256 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.74■□□□□ 0.27
CD58P19256 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.74■□□□□ 0.27
CD58P19256 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CD58P19256 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.73■□□□□ 0.27
CD58P19256 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CD58P19256 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.73■□□□□ 0.27
CD58P19256 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.73■□□□□ 0.27
CD58P19256 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.73■□□□□ 0.27
CD58P19256 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms