Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.04■□□□□ 0.16
ERCC2P18074 AL096865.1-201ENST00000606796 927 ntBASIC16.04■□□□□ 0.16
ERCC2P18074 AC116165.1-201ENST00000611806 668 ntBASIC16.04■□□□□ 0.16
ERCC2P18074 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.04■□□□□ 0.16
ERCC2P18074 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC2P18074 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC2P18074 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC2P18074 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC2P18074 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC2P18074 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC2P18074 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC2P18074 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC2P18074 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.04■□□□□ 0.16
ERCC2P18074 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC2P18074 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC2P18074 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERCC2P18074 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ERCC2P18074 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ERCC2P18074 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ERCC2P18074 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 AC148477.4-201ENST00000613430 1793 ntBASIC16.03■□□□□ 0.16
ERCC2P18074 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.03■□□□□ 0.16
ERCC2P18074 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.03■□□□□ 0.16
ERCC2P18074 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.03■□□□□ 0.16
ERCC2P18074 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.03■□□□□ 0.16
ERCC2P18074 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.03■□□□□ 0.16
ERCC2P18074 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 SERBP1P5-201ENST00000510079 1181 ntBASIC16.03■□□□□ 0.16
ERCC2P18074 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.03■□□□□ 0.16
ERCC2P18074 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.03■□□□□ 0.16
ERCC2P18074 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.03■□□□□ 0.16
ERCC2P18074 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.03■□□□□ 0.16
ERCC2P18074 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.03■□□□□ 0.16
ERCC2P18074 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.03■□□□□ 0.16
ERCC2P18074 AC011467.4-201ENST00000594891 528 ntBASIC16.03■□□□□ 0.16
ERCC2P18074 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.03■□□□□ 0.16
ERCC2P18074 AC025181.2-201ENST00000606994 802 ntBASIC16.03■□□□□ 0.16
ERCC2P18074 AC009118.2-201ENST00000613275 655 ntBASIC16.03■□□□□ 0.16
ERCC2P18074 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ERCC2P18074 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
ERCC2P18074 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.03■□□□□ 0.16
ERCC2P18074 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.03■□□□□ 0.16
ERCC2P18074 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.03■□□□□ 0.16
ERCC2P18074 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.03■□□□□ 0.16
ERCC2P18074 CICP11-201ENST00000434745 2827 ntBASIC16.03■□□□□ 0.16
ERCC2P18074 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ERCC2P18074 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERCC2P18074 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.02■□□□□ 0.16
ERCC2P18074 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
ERCC2P18074 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC2P18074 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ERCC2P18074 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC2P18074 AC023024.2-201ENST00000623561 1993 ntBASIC16.02■□□□□ 0.16
ERCC2P18074 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC2P18074 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.02■□□□□ 0.16
ERCC2P18074 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC2P18074 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC2P18074 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.02■□□□□ 0.16
ERCC2P18074 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.02■□□□□ 0.16
ERCC2P18074 SPTLC1P1-201ENST00000447199 261 ntBASIC16.02■□□□□ 0.16
ERCC2P18074 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.02■□□□□ 0.16
ERCC2P18074 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC2P18074 RARRES2P5-201ENST00000564013 466 ntBASIC16.02■□□□□ 0.16
ERCC2P18074 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC2P18074 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.02■□□□□ 0.16
ERCC2P18074 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC2P18074 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC2P18074 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.02■□□□□ 0.16
ERCC2P18074 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERCC2P18074 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.02■□□□□ 0.15
ERCC2P18074 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC2P18074 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.02■□□□□ 0.15
ERCC2P18074 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC2P18074 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
ERCC2P18074 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC2P18074 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
ERCC2P18074 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC2P18074 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC2P18074 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.02■□□□□ 0.15
ERCC2P18074 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC2P18074 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC2P18074 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.02■□□□□ 0.15
ERCC2P18074 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC2P18074 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC2P18074 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERCC2P18074 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms