Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.8□□□□□ -0.04
NCK1P16333 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.8□□□□□ -0.04
NCK1P16333 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NCK1P16333 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NCK1P16333 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.8□□□□□ -0.04
NCK1P16333 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NCK1P16333 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.79□□□□□ -0.04
NCK1P16333 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.79□□□□□ -0.04
NCK1P16333 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NCK1P16333 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NCK1P16333 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
NCK1P16333 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
NCK1P16333 ACE3P-201ENST00000423435 1973 ntBASIC14.79□□□□□ -0.04
NCK1P16333 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.79□□□□□ -0.04
NCK1P16333 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.79□□□□□ -0.04
NCK1P16333 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 KRT8P37-201ENST00000451609 1420 ntBASIC14.79□□□□□ -0.04
NCK1P16333 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.79□□□□□ -0.04
NCK1P16333 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
NCK1P16333 KRT19P2-202ENST00000557173 1012 ntBASIC14.79□□□□□ -0.04
NCK1P16333 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.79□□□□□ -0.04
NCK1P16333 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.79□□□□□ -0.04
NCK1P16333 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NCK1P16333 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.79□□□□□ -0.04
NCK1P16333 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NCK1P16333 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.79□□□□□ -0.04
NCK1P16333 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NCK1P16333 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.79□□□□□ -0.04
NCK1P16333 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.79□□□□□ -0.04
NCK1P16333 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.79□□□□□ -0.04
NCK1P16333 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NCK1P16333 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NCK1P16333 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NCK1P16333 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.79□□□□□ -0.04
NCK1P16333 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NCK1P16333 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NCK1P16333 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.78□□□□□ -0.04
NCK1P16333 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NCK1P16333 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NCK1P16333 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.78□□□□□ -0.04
NCK1P16333 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NCK1P16333 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.78□□□□□ -0.04
NCK1P16333 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NCK1P16333 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NCK1P16333 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NCK1P16333 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
NCK1P16333 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
NCK1P16333 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.78□□□□□ -0.04
NCK1P16333 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.78□□□□□ -0.04
NCK1P16333 CYP4F24P-201ENST00000586049 1580 ntBASIC14.78□□□□□ -0.04
NCK1P16333 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NCK1P16333 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NCK1P16333 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.78□□□□□ -0.04
NCK1P16333 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NCK1P16333 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.78□□□□□ -0.04
NCK1P16333 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NCK1P16333 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.78□□□□□ -0.04
NCK1P16333 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.78□□□□□ -0.04
NCK1P16333 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.78□□□□□ -0.04
NCK1P16333 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.78□□□□□ -0.04
NCK1P16333 RNA5SP410-201ENST00000516285 106 ntBASIC14.78□□□□□ -0.04
NCK1P16333 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NCK1P16333 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.78□□□□□ -0.04
NCK1P16333 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.78□□□□□ -0.04
NCK1P16333 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.78□□□□□ -0.04
NCK1P16333 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.78□□□□□ -0.04
NCK1P16333 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.78□□□□□ -0.04
NCK1P16333 AL773604.1-201ENST00000617417 272 ntBASIC14.78□□□□□ -0.04
NCK1P16333 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NCK1P16333 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.78□□□□□ -0.04
NCK1P16333 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NCK1P16333 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NCK1P16333 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms