Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
BRAFP15056 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
BRAFP15056 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.12■□□□□ 0.17
BRAFP15056 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.12■□□□□ 0.17
BRAFP15056 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.12■□□□□ 0.17
BRAFP15056 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
BRAFP15056 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.12■□□□□ 0.17
BRAFP15056 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.12■□□□□ 0.17
BRAFP15056 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 AC142381.1-201ENST00000426099 345 ntBASIC16.12■□□□□ 0.17
BRAFP15056 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.12■□□□□ 0.17
BRAFP15056 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
BRAFP15056 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
BRAFP15056 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.12■□□□□ 0.17
BRAFP15056 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.12■□□□□ 0.17
BRAFP15056 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.12■□□□□ 0.17
BRAFP15056 AC004449.1-201ENST00000564240 433 ntBASIC16.12■□□□□ 0.17
BRAFP15056 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
BRAFP15056 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.12■□□□□ 0.17
BRAFP15056 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.12■□□□□ 0.17
BRAFP15056 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRAFP15056 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.12■□□□□ 0.17
BRAFP15056 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.11■□□□□ 0.17
BRAFP15056 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.11■□□□□ 0.17
BRAFP15056 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.11■□□□□ 0.17
BRAFP15056 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.11■□□□□ 0.17
BRAFP15056 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.11■□□□□ 0.17
BRAFP15056 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 AC126365.1-201ENST00000578585 1514 ntBASIC16.11■□□□□ 0.17
BRAFP15056 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
BRAFP15056 AL645939.2-201ENST00000427340 991 ntBASIC16.11■□□□□ 0.17
BRAFP15056 RBPMS2P1-201ENST00000437762 623 ntBASIC16.11■□□□□ 0.17
BRAFP15056 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.11■□□□□ 0.17
BRAFP15056 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.11■□□□□ 0.17
BRAFP15056 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.11■□□□□ 0.17
BRAFP15056 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.11■□□□□ 0.17
BRAFP15056 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 PRYP6-201ENST00000514804 343 ntBASIC16.11■□□□□ 0.17
BRAFP15056 AC105233.2-201ENST00000523697 349 ntBASIC16.11■□□□□ 0.17
BRAFP15056 AF228730.5-201ENST00000530288 346 ntBASIC16.11■□□□□ 0.17
BRAFP15056 RFPL4AP1-201ENST00000530883 850 ntBASIC16.11■□□□□ 0.17
BRAFP15056 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.11■□□□□ 0.17
BRAFP15056 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.11■□□□□ 0.17
BRAFP15056 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.11■□□□□ 0.17
BRAFP15056 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BRAFP15056 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.11■□□□□ 0.17
BRAFP15056 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BRAFP15056 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.11■□□□□ 0.17
BRAFP15056 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.11■□□□□ 0.17
BRAFP15056 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRAFP15056 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.1■□□□□ 0.17
BRAFP15056 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.1■□□□□ 0.17
BRAFP15056 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.1■□□□□ 0.17
BRAFP15056 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.1■□□□□ 0.17
BRAFP15056 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
BRAFP15056 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
BRAFP15056 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
BRAFP15056 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.1■□□□□ 0.17
BRAFP15056 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms