Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
COL11A1P12107 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.33■□□□□ 0.37
COL11A1P12107 AC138627.1-207ENST00000641560 1006 ntBASIC17.33■□□□□ 0.37
COL11A1P12107 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL11A1P12107 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.33■□□□□ 0.37
COL11A1P12107 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.33■□□□□ 0.37
COL11A1P12107 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.33■□□□□ 0.36
COL11A1P12107 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
COL11A1P12107 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.33■□□□□ 0.36
COL11A1P12107 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
COL11A1P12107 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL11A1P12107 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
COL11A1P12107 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
COL11A1P12107 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL11A1P12107 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.33■□□□□ 0.36
COL11A1P12107 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
COL11A1P12107 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL11A1P12107 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
COL11A1P12107 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL11A1P12107 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL11A1P12107 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL11A1P12107 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL11A1P12107 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.33■□□□□ 0.36
COL11A1P12107 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.33■□□□□ 0.36
COL11A1P12107 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL11A1P12107 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL11A1P12107 AC084346.2-201ENST00000607097 949 ntBASIC17.33■□□□□ 0.36
COL11A1P12107 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.33■□□□□ 0.36
COL11A1P12107 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL11A1P12107 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL11A1P12107 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL11A1P12107 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.32■□□□□ 0.36
COL11A1P12107 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL11A1P12107 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.32■□□□□ 0.36
COL11A1P12107 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL11A1P12107 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.32■□□□□ 0.36
COL11A1P12107 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.32■□□□□ 0.36
COL11A1P12107 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.32■□□□□ 0.36
COL11A1P12107 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL11A1P12107 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.32■□□□□ 0.36
COL11A1P12107 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL11A1P12107 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL11A1P12107 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL11A1P12107 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
COL11A1P12107 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.32■□□□□ 0.36
COL11A1P12107 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
COL11A1P12107 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
COL11A1P12107 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.32■□□□□ 0.36
COL11A1P12107 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.32■□□□□ 0.36
COL11A1P12107 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.32■□□□□ 0.36
COL11A1P12107 AC009955.4-201ENST00000597192 544 ntBASIC17.32■□□□□ 0.36
COL11A1P12107 AC091812.3-201ENST00000621362 345 ntBASIC17.32■□□□□ 0.36
COL11A1P12107 AC015967.2-201ENST00000624092 234 ntBASIC17.32■□□□□ 0.36
COL11A1P12107 AC006435.4-201ENST00000625037 234 ntBASIC17.32■□□□□ 0.36
COL11A1P12107 AL356737.1-201ENST00000634391 234 ntBASIC17.32■□□□□ 0.36
COL11A1P12107 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL11A1P12107 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL11A1P12107 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL11A1P12107 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.32■□□□□ 0.36
COL11A1P12107 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL11A1P12107 AL138725.1-201ENST00000407347 1314 ntBASIC17.32■□□□□ 0.36
COL11A1P12107 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.32■□□□□ 0.36
COL11A1P12107 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COL11A1P12107 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL11A1P12107 AC008132.1-202ENST00000342005 1389 ntBASIC17.32■□□□□ 0.36
COL11A1P12107 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL11A1P12107 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL11A1P12107 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL11A1P12107 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
COL11A1P12107 AC004899.1-201ENST00000424687 1714 ntBASIC17.31■□□□□ 0.36
COL11A1P12107 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL11A1P12107 KRT8P19-201ENST00000551916 1455 ntBASIC17.31■□□□□ 0.36
COL11A1P12107 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
COL11A1P12107 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL11A1P12107 CYP46A4P-201ENST00000414953 267 ntBASIC17.31■□□□□ 0.36
COL11A1P12107 ACTG1P2-201ENST00000415776 1125 ntBASIC17.31■□□□□ 0.36
COL11A1P12107 ACTG1P11-201ENST00000425411 1125 ntBASIC17.31■□□□□ 0.36
COL11A1P12107 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.31■□□□□ 0.36
COL11A1P12107 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.31■□□□□ 0.36
COL11A1P12107 UPF3AP2-201ENST00000457924 1132 ntBASIC17.31■□□□□ 0.36
COL11A1P12107 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.31■□□□□ 0.36
COL11A1P12107 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.31■□□□□ 0.36
COL11A1P12107 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL11A1P12107 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.31■□□□□ 0.36
COL11A1P12107 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL11A1P12107 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL11A1P12107 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL11A1P12107 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.31■□□□□ 0.36
COL11A1P12107 DOC2GP-204ENST00000639052 2548 ntBASIC17.31■□□□□ 0.36
COL11A1P12107 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL11A1P12107 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL11A1P12107 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
COL11A1P12107 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL11A1P12107 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.31■□□□□ 0.36
COL11A1P12107 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL11A1P12107 AP000845.1-201ENST00000581677 2131 ntBASIC17.31■□□□□ 0.36
COL11A1P12107 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.31■□□□□ 0.36
COL11A1P12107 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL11A1P12107 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
COL11A1P12107 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms